A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2677779



Internal ID9943884
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:186292826..186293603hg38UCSC Ensembl
chr4:187213980..187214757hg19UCSC Ensembl
Cytoband4q35.2
Allele length
AssemblyAllele length
hg38778
hg19778
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5747280, essv6382628, essv6227205, essv5795717, essv6113871, essv5442498, essv5732160, essv6025134, essv6509440, essv5958979, essv5499028, essv5708770, essv5540242, essv6052198, essv5627075, essv5633808, essv5790113, essv6265603, essv5975033, essv6353048, essv5593845, essv5624869, essv6096360, essv5470459, essv6578267, essv5788608, essv5466769, essv5871830, essv6210108, essv5852062, essv6011641, essv5415485, essv6272641, essv6203800, essv5622519, essv5571407, essv6066945, essv5812170, essv5749129, essv5999532, essv6108564, essv5802245, essv6410509, essv5767509, essv6139131, essv6544570, essv5493021, essv6160321, essv6211227, essv5865361, essv6043452, essv5551720, essv6537685, essv6303431, essv5681022, essv6189017, essv6073879, essv5427881, essv5900909, essv6166067, essv5894733, essv5600610, essv6415743, essv5774670, essv6544826, essv6551229, essv5462236, essv6567468, essv5754707, essv6385210, essv6133717, essv5747096, essv6532144, essv5442227, essv6495641, essv6046384, essv5998357, essv5408076, essv6587035, essv5520358, essv6175818, essv5969194, essv6070233, essv5936349, essv5531188, essv6018126, essv5419837, essv6142482, essv6170112, essv5953204, essv5682666, essv6261626, essv6234288, essv5614444, essv5643069, essv5744380, essv6273657, essv5685305, essv6090052, essv6313214, essv6161579, essv5847547, essv6237573, essv6562828, essv5940693, essv5631873, essv5799218, essv5517284, essv5840427, essv6574802, essv6326474, essv6276762, essv5984272, essv5427688, essv5597440, essv5853342, essv6042744, essv5659640, essv5990755, essv6197135, essv5541317, essv6394100, essv6446735, essv6307063, essv5467103, essv6287837, essv6332844, essv5463573, essv5769089, essv5516836, essv5523476, essv5965496, essv6189390, essv6219099, essv6288969, essv6150183, essv6590942, essv5654644, essv6503290, essv5763316, essv6382366, essv5567429, essv6541201, essv6050240, essv5787238, essv5430250, essv5599664, essv6451620, essv5684254, essv6551150, essv6179225, essv6230244, essv6030482, essv6585414, essv6553883, essv6092054, essv5648563, essv5707437, essv5466856, essv6009330, essv5854917, essv6174186, essv5951255, essv6528257, essv6116874, essv6234549, essv6585295, essv6117750, essv5849104, essv6369362, essv5492035, essv5476374, essv5984160, essv5953728, essv5538853, essv6140019, essv5681078, essv6516845, essv5446155, essv6055524, essv6541723, essv6396891, essv5813339, essv6234285, essv6588948, essv6217419, essv5658598, essv5425163, essv6316827, essv5740071, essv6491314, essv5639093, essv5850428, essv6345707, essv6288253, essv6199042, essv5932109, essv6366467, essv5869129, essv5990341, essv5530262, essv6049095, essv5793836, essv5645052, essv5685946, essv6333113, essv5848441, essv6531017, essv6150459, essv6066964, essv5444170, essv5935460, essv5776757, essv5490621, essv5742191, essv5541407, essv5498077, essv6290596, essv5918048, essv5557820, essv5731538, essv6486873, essv5694233, essv6134564, essv6489606, essv6310560, essv5752351, essv6225729, essv6221627, essv6203310, essv5717516, essv5507195, essv6065166, essv5704452, essv6365753, essv6042920, essv6027650, essv5922153, essv5636884, essv6414361, essv6193143, essv5720604, essv6422194, essv6005671, essv6180194, essv5703070, essv6220504, essv5560384, essv5661664, essv6409149, essv5892451, essv6317846, essv5802732, essv6586700, essv6196521, essv5971756, essv6064236
SamplesNA20588, NA19394, NA19701, NA19703, HG01462, NA12286, NA19664, HG00242, NA19204, NA18861, NA18508, NA19399, HG00315, NA20802, NA19350, NA19359, NA19443, HG01051, NA20356, NA19920, HG01522, HG00271, NA20814, NA19446, HG00641, HG00138, HG01350, NA18519, NA19319, NA19315, NA20589, NA18923, NA20795, HG01492, NA18916, NA07347, HG00334, NA11930, HG00139, HG01069, HG00232, NA19372, NA19238, NA11994, NA19235, NA19207, NA19172, NA19722, NA19239, HG01048, NA20342, HG00326, NA20127, NA18867, NA19921, NA20753, NA12777, HG00154, HG00731, HG01171, HG00380, NA12878, NA18933, NA20521, NA20760, NA19455, NA19663, HG00275, NA20519, NA18907, HG01047, HG00324, HG00250, NA20581, NA12829, HG00684, NA19453, NA18912, NA19099, NA19452, HG00704, NA19682, NA18523, NA19469, NA19318, NA19395, NA12043, NA19375, NA19652, NA19440, NA19390, HG00336, NA18517, NA20815, NA19331, NA20790, NA20530, HG01375, NA19835, NA20792, NA20778, NA19311, HG00116, NA19360, NA12763, HG01342, NA19328, HG00259, NA19223, NA19474, NA20289, NA19102, NA19116, NA19711, HG00377, NA20503, NA19430, NA19129, NA12890, NA19463, NA12154, NA19065, NA19431, NA20772, HG00403, NA19700, NA19397, NA19466, HG00361, NA19332, NA19704, NA18507, HG00306, NA18917, NA12045, NA18486, HG01465, NA19393, NA20805, NA12058, NA20346, HG00150, NA19190, NA12400, HG01140, HG00327, HG01250, NA19396, NA19381, NA18550, NA18489, NA19448, NA19916, NA20769, HG00736, NA19771, NA19313, NA19138, NA18498, NA18964, NA20541, NA19404, NA12761, NA12282, HG01455, NA19383, NA18874, NA06984, HG01170, NA19137, HG01072, NA20340, NA19371, NA19385, NA19471, NA19317, NA12889, NA19159, HG00309, NA19209, NA19456, NA19445, NA19451, NA19200, NA12748, NA20818, NA19007, NA18614, HG01353, HG00313, HG00149, NA19247, NA19657, NA19437, NA18934, NA12342, NA19462, NA19347, NA19152, NA20809, NA19391, NA19327, NA19236, NA18516, HG00500, NA18910, HG01390, HG01073, HG00273, NA19114, NA20299, NA19449, HG00373, HG01197, NA12892, NA19338, NA19257, NA19436, NA19685, NA19401, HG00124, NA20522, NA12716, HG00119, NA18909, NA19321, NA19473, NA18950, NA19732, NA19435, HG00638, NA19240, NA19380, NA19144, NA19334, NA20516, HG01108, NA20341, NA19818, NA19398, NA20348, NA19248, HG01491, NA19438, NA19472, NA19060, HG01055, HG00186, HG00343, NA19661, HG01377, NA18505, NA19755, NA20322, HG00180, NA18622, NA19153
Known GenesF11-AS1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2677779
Frequency
Sample Size1151
Observed Gain0
Observed Loss257
Observed Complex0
Frequencyn/a


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