Variant Details

Variant: esv2677402

Internal ID

9596821

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr13:113842232..113845549	hg38	UCSC Ensembl
Outer	chr13:113841822..113845969	hg38	UCSC Ensembl
Inner	chr13:114545205..114548522	hg19	UCSC Ensembl
Outer	chr13:114544795..114548942	hg19	UCSC Ensembl

Cytoband

13q34

Allele length

Assembly	Allele length
hg38	4148
hg19	4148

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv5486993, essv5476927, essv5924224, essv5538562, essv5582887, essv5841736, essv6088909, essv6280679, essv6152181, essv5417012, essv5659942, essv6349238, essv5828810, essv6485005, essv6550042, essv6026560, essv6465862, essv6079639, essv6229293, essv5645900, essv5853425, essv5534006, essv5937783, essv5500092, essv5528090, essv6132313, essv5837770, essv5531118, essv6033916, essv6413376, essv6425486, essv5464137, essv5873089, essv5674301, essv6007511, essv6016812, essv5805470, essv5407579, essv5651566, essv5818895, essv5766204, essv5831631, essv6048365, essv5885552, essv5625852, essv5604306, essv6072924, essv5804218, essv6156958, essv6382416, essv6561548, essv6366654, essv5723087, essv5462607, essv5658798, essv6575427, essv6221316, essv6324746, essv6081680, essv5569646, essv6032529, essv5876331, essv6078520, essv5833779, essv6396556, essv6070490, essv5852782, essv5896471, essv5645108, essv6116969, essv6077804, essv5405698, essv6190490, essv6169651, essv6193126, essv5602779, essv5917245

Samples

NA19204, NA18508, NA19332, NA18507, NA18504, NA18870, NA19107, NA19446, NA19396, NA19448, NA18923, NA19198, NA19916, NA19457, HG01083, NA19904, NA19404, HG00281, NA20539, NA19383, NA19371, NA19385, HG00637, NA19456, NA19445, NA19451, NA19247, NA19437, NA19707, NA18934, NA19347, NA19152, NA19391, NA19327, NA19455, NA20126, NA18910, NA18871, HG00324, NA18499, NA19257, NA19452, NA19469, NA19318, NA19160, NA19401, NA19375, NA19440, NA19390, NA19256, NA19147, NA19712, NA19434, NA19473, HG00375, NA19444, HG00278, HG01375, NA19439, NA19311, NA19467, NA19360, NA19398, NA19248, NA19438, NA19474, NA19093, HG00186, HG00274, NA19430, NA18505, NA18488, NA19463, NA18511, NA19346, NA18487, NA19431

Known Genes

GAS6, GAS6-AS1

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2677402

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	77
Observed Complex	0
Frequency	n/a