Variant Details

Variant: esv2676887

Internal ID

9596306

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr17:36182836..36224278	hg38	UCSC Ensembl
Outer	chr17:36182365..36224848	hg38	UCSC Ensembl
Inner	chr17:34510216..34551722	hg19	UCSC Ensembl
Outer	chr17:34509745..34552292	hg19	UCSC Ensembl

Cytoband

17q12

Allele length

Assembly	Allele length
hg38	42484
hg19	42548

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv545e199

Supporting Variants

essv6420165, essv6115335, essv6413602, essv5639642, essv5996833, essv6552410, essv5909984, essv5656682, essv5789736, essv5842738, essv6090809, essv5536212, essv6444097, essv5663162, essv6168723, essv6129306, essv5934352, essv5945452, essv6185624, essv6557751, essv6117982, essv6013254, essv5561274, essv5475422, essv5860552, essv6189129, essv6403780, essv5789904, essv5665843, essv6570704, essv5955587, essv5680162, essv6341120, essv6442954, essv5451557, essv5994195, essv5692120, essv6006416, essv5398590, essv5659132, essv5577656, essv6111131, essv6358782, essv6185242, essv6067171, essv6240275, essv6208032, essv6494148, essv5638315, essv5438495, essv6076842, essv5991473, essv6059342, essv5896534, essv5829237, essv5785280, essv6476520, essv6487093, essv5786106, essv5441443, essv6400029, essv6304758, essv6044161, essv5446563, essv6116720, essv5734761, essv5945808, essv5748319, essv6154344, essv5587003, essv6590823, essv6309767, essv5759310, essv5653848, essv5591005, essv5638935, essv6290822, essv5663619, essv5905322, essv5978148, essv5980025, essv5729349, essv6571574, essv5646986, essv5452758, essv5471162, essv6506259, essv6198192, essv6072948, essv5880287, essv5444257, essv5662132, essv5758100, essv6108032, essv5462896, essv5580999, essv6150613, essv5686651, essv6149789, essv6511471, essv5532641, essv5781717, essv6324176, essv5522659, essv5828330, essv6312678, essv6432472, essv6561422, essv5463296, essv6433874, essv6227006, essv5614955, essv5981641, essv6523098, essv6041100, essv5945923, essv5866984, essv6253957, essv6280801, essv6268696, essv6287381, essv6240465, essv6100590, essv6589954, essv5494441, essv5473469, essv6386576, essv5949713, essv6017627, essv5775632, essv5508018, essv5633881, essv6410128, essv5834908, essv5635830, essv6064905, essv5458287, essv5631019, essv5967944, essv6205729, essv6438587, essv5726967, essv6363679, essv6520175, essv5847440, essv5586304, essv5950576, essv5736374, essv5573314, essv5963151, essv5496452, essv5503489, essv6313677, essv5768617, essv5677408, essv5629324, essv6597711, essv6428219, essv5474103, essv6451559, essv5420308, essv5618163, essv5950939, essv6452137, essv6037094, essv6325455

Samples

HG00096, HG01060, HG00189, HG00114, HG01173, HG01098, HG00249, HG00242, HG01052, HG00187, HG00100, HG01188, HG00257, HG01066, HG00315, HG00306, HG00151, HG00233, HG00640, HG00367, HG00318, HG00244, HG00181, HG00103, HG00737, HG00179, HG00115, HG00177, HG00150, HG01051, HG00261, HG00337, HG00327, HG00271, HG00641, HG00138, HG00127, HG00251, HG00122, HG01168, HG00736, HG00346, HG00247, HG00270, HG00185, HG00243, HG00158, HG00281, HG00277, HG01069, HG01080, HG01067, HG00120, HG00335, HG00148, HG00106, HG01170, HG00236, HG00156, HG00262, HG01072, HG00232, HG01176, HG00309, HG00182, HG00160, HG00118, HG01198, HG00637, HG00338, HG00159, HG01048, HG00326, HG00178, HG00323, HG00264, HG00108, HG00260, HG00313, HG00137, HG00133, HG01183, HG00188, HG00154, HG00149, HG00731, HG00268, HG00266, HG00183, HG00176, HG01187, HG01171, HG00282, HG00328, HG00245, HG00190, HG00732, HG01095, HG00320, HG00344, HG00263, HG00275, HG00239, HG00740, HG01102, HG00324, HG01073, HG00273, HG00250, HG00373, HG01197, HG01182, HG00117, HG00321, HG00157, HG00140, HG00152, HG00146, HG00246, HG00126, HG01107, HG01204, HG00258, HG00124, HG00155, HG00254, HG00119, HG01190, HG00336, HG00285, HG00265, HG00353, HG00357, HG00136, HG00638, HG01174, HG00237, HG00319, HG00116, HG00256, HG00339, HG00269, HG00125, HG00312, HG00259, HG00329, HG00342, HG00267, HG00174, HG00123, HG00310, HG00186, HG00112, HG00280, HG00131, HG00343, HG00372, HG00274, HG00252, HG01082, HG00345, HG01097, HG00554, HG00180, HG01061, HG00553

Known Genes

CCL3L1, CCL3L3, CCL4L1, CCL4L2

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2676887

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	166
Observed Complex	0
Frequency	n/a