A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2676406



Internal ID9942511
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:1601229..1601942hg38UCSC Ensembl
chr4:1602956..1603669hg19UCSC Ensembl
Cytoband4p16.3
Allele length
AssemblyAllele length
hg38714
hg19714
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6240369, essv6021290, essv6514805, essv5395628, essv5781202, essv5790736, essv5977429, essv6311220, essv5547860, essv6561940, essv6479646, essv6097770, essv6378039, essv5802326, essv5963156, essv5737240, essv6105314, essv5427119, essv6488522, essv6596766, essv5507399, essv5655940, essv5782671, essv5598566, essv5997963, essv5547216, essv5422295, essv6181650, essv5885038, essv5832863, essv5876563, essv5740521, essv5676200, essv6069784, essv5423992, essv5675633, essv5891741, essv5851112, essv5752772, essv6487298, essv6482377, essv6423914, essv5517421, essv6348126, essv6552549, essv6399944, essv5417443, essv5960712, essv5653303, essv5833916, essv5995246, essv5543875, essv5760582, essv5964704, essv5895037, essv5660778, essv5671139, essv6254668, essv5565835, essv5434001, essv5911925, essv6065246, essv6011867, essv6104839, essv5707282, essv6301924, essv6313602, essv6173351, essv6231467, essv6138591, essv6590432, essv5956803, essv6288855, essv6343635, essv5427389, essv5700952, essv6135227, essv5656652, essv6507504, essv6564973, essv5938975, essv5618393, essv5708842, essv6272944, essv6546407, essv5573705, essv6226774, essv6082980, essv5672619, essv6566784, essv5404548, essv6492138, essv5865652, essv5979898, essv6250859, essv6357968, essv6351477, essv6446898, essv6566026, essv5761344, essv6183433, essv5694661, essv5487904, essv6485420, essv5585906, essv6522177, essv6174031, essv5801233, essv6561036, essv6169791, essv6561550, essv6156797, essv5793537, essv5409027, essv6287150, essv6152866, essv6544542, essv6120137, essv5861055, essv5646872, essv6197522, essv6058770, essv5656687, essv5769294, essv6233697, essv5831415, essv6117891, essv5424224, essv6499311, essv5508569, essv5417459, essv6183169, essv6506128, essv5613666, essv5796517, essv6240665, essv5739134, essv5702319, essv5789624, essv5647745, essv5621511, essv5941447, essv5756472, essv6264135, essv6593464, essv6583788, essv5543053, essv5654044, essv5530327, essv5595950, essv5686652, essv5396637, essv6512133, essv5851969, essv6272564, essv5970484, essv5574263, essv6229792, essv5728250, essv6244281, essv5639716, essv5963885, essv6033021, essv6318211, essv5539259, essv5976989, essv6445454, essv5705703, essv5753891, essv6296108, essv6378728, essv6009258, essv6421188, essv6505799, essv6501708, essv6093752, essv6064499, essv6160578, essv6042922, essv6266262, essv5847513, essv6398240, essv5709904, essv5656209, essv6042987, essv5920897, essv6100914, essv5701937, essv5993115, essv6155960, essv6511940, essv6509140, essv5742233, essv6162464, essv6144239, essv5880403, essv6532079, essv5559662, essv6240142, essv5556323, essv5624058, essv5444405, essv6253848, essv6543990, essv6241670, essv6329081, essv5987738, essv6030878, essv6111863, essv6442857, essv6485213, essv6368983, essv5578238, essv5906340, essv5447856, essv6374916, essv6281342, essv5622509, essv5622666, essv6328224, essv6022236, essv6589797, essv5616616, essv5427005, essv5967892, essv6130036, essv6489060, essv5784711, essv5991356, essv6100748, essv5413419, essv6545846, essv6015972, essv6481648, essv6343817, essv6412435, essv6269549, essv6504010, essv5968095, essv6135461, essv5610390, essv5486384, essv6393020, essv6305466, essv5720008, essv6479889, essv6156915, essv6198210, essv5873242, essv5542517, essv5415421, essv5835559, essv5603050, essv6205318, essv6425199, essv6139162, essv6396584, essv6417133, essv6439955, essv5567856, essv6094161, essv6266940, essv6073348, essv5556519, essv5867213, essv6485258, essv5664100, essv5976588, essv6530136, essv6324269, essv5800728, essv5898152, essv6416305, essv5741973, essv6459049, essv5579423, essv5648275, essv6279627, essv6398404, essv6154623, essv5531923, essv5586078, essv5924986, essv6397754, essv6195696, essv6054396, essv5477745, essv5542096, essv5739384, essv6481400, essv5568596, essv5539137, essv6507646, essv6529804, essv6241545, essv5726210, essv6186302, essv6378802, essv6462655, essv5400888, essv6373483, essv5471573, essv6014020, essv6469434, essv5516965, essv5651395, essv6443586, essv5424629, essv6021610, essv6157814, essv6001961, essv5454486, essv6498106, essv6188360, essv6367292, essv6360092, essv6563407, essv6537473, essv5670140, essv5439943, essv6252052, essv6459429, essv5997096, essv5602579, essv5839415, essv5896777, essv6022683, essv6091750, essv6524061, essv6341845, essv5782797, essv5585749, essv5655362, essv6575354, essv6460969
SamplesNA12383, NA18502, HG00650, NA12717, HG01173, NA12842, HG01462, HG00142, NA20766, NA18947, NA19664, NA19204, NA18861, NA10851, NA19399, NA12273, NA18565, NA12414, NA12843, NA11931, HG00257, HG01066, HG00151, NA20802, NA20512, HG00244, NA12751, NA12340, HG01518, NA19443, HG01051, NA19920, HG00261, NA18510, NA12399, HG01522, HG00337, NA12813, NA20814, NA07346, NA18563, NA19171, NA19379, NA18519, HG00589, NA18597, NA20589, NA20774, NA20756, NA18567, NA20795, HG01492, NA07048, NA11918, NA07347, NA18582, HG01365, HG00185, NA19904, NA19384, HG00311, NA19130, HG00158, NA11930, HG00281, NA20759, NA20539, NA12275, HG00148, NA20775, NA12156, NA18868, NA11932, NA19238, NA12044, NA11994, HG00534, NA19235, NA19207, NA19172, HG00705, NA18990, NA19239, NA18557, HG01048, HG01133, NA18867, NA20755, NA20753, NA20535, NA19670, NA12878, NA18933, NA20521, NA20810, NA20760, NA19455, HG00275, NA12718, NA18871, NA18981, HG00740, NA18907, HG01047, NA11919, NA12829, NA11893, NA18912, NA06989, HG01101, NA18553, NA19059, HG01334, HG00152, HG00146, NA19682, NA18523, NA19318, NA18570, NA18858, NA12546, HG00265, NA19256, NA19147, NA20276, HG00353, HG00580, NA12272, NA20790, NA20530, NA20778, HG00237, HG01113, HG01137, HG00116, NA20281, NA19783, NA12763, HG01489, NA12347, NA18501, HG00614, NA06994, NA19785, HG00342, NA19716, HG00267, NA19093, NA20510, NA20786, NA18873, HG00280, NA11843, NA20758, NA19116, NA19780, NA19900, HG00377, NA20502, NA19129, NA11892, HG00171, NA12890, NA12006, NA12154, NA20754, NA19429, HG01437, HG00553, NA11832, NA19676, HG01516, HG00096, NA11830, HG01521, HG00249, NA11995, NA11829, HG00361, HG00187, NA18507, NA20531, NA11933, HG01374, HG00306, NA20813, NA20532, NA18917, NA12045, HG00640, HG00367, NA18545, NA19819, NA20805, NA18596, HG00566, NA12058, NA18606, HG00177, NA19190, NA19098, NA18870, NA12400, NA12155, NA07357, NA12413, NA12341, NA19374, HG01250, NA19746, HG00127, NA20796, NA18550, HG01366, HG01070, NA20586, NA19119, NA18635, NA19198, NA18619, NA12891, NA11992, NA12283, NA12287, NA19138, HG00369, NA20513, NA18964, NA12761, HG01067, NA18874, NA06984, HG01170, HG01495, NA19137, NA20340, NA18560, NA19731, NA12889, HG01440, HG00182, NA19189, NA18520, HG00637, NA19209, NA12828, NA19445, NA18973, NA19200, NA12748, NA11993, NA20818, NA11831, NA10847, HG01353, HG00133, HG00188, HG00149, NA19247, HG01360, HG00183, HG00176, NA20787, HG00328, NA12342, NA12003, HG00428, NA19462, NA19152, HG00190, NA18956, HG01515, NA18910, NA18976, HG00273, NA19114, NA18499, NA11894, NA20538, NA12249, HG01383, NA12892, NA18853, NA12827, NA19257, NA19160, NA18576, NA20765, HG00476, NA20773, NA20801, NA12716, HG00119, NA18909, NA11881, NA19834, NA19108, NA18952, NA12775, HG00357, NA19732, HG00638, NA20804, NA19144, NA07051, NA12046, NA19334, NA20504, NA07037, NA06986, NA19818, NA19078, HG00312, HG00421, HG00329, NA12749, HG00656, HG01055, NA12830, NA20807, HG00698, NA19213, HG01251, NA07056, NA18505, NA18511, NA07000, NA18522, HG01112, HG01097, HG00554, HG01061, HG00437, NA12776, NA20509
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2676406
Frequency
Sample Size1151
Observed Gain0
Observed Loss335
Observed Complex0
Frequencyn/a


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