Variant Details

Variant: esv2675308

Internal ID

9594727

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr9:104833906..104834822	hg38	UCSC Ensembl
	chr9:107596187..107597103	hg19	UCSC Ensembl

Cytoband

9q31.1

Allele length

Assembly	Allele length
hg38	917
hg19	917

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv1366e199

Supporting Variants

essv5907944, essv6349660, essv6160930, essv6363142, essv6534276, essv6547358, essv6010359, essv6374058, essv6342600, essv6195972, essv6167625, essv6535640, essv6504066, essv5415310, essv5438248, essv5673230, essv5664885, essv6576878, essv5473274, essv5517882, essv6496769, essv5560630, essv6547291, essv6131336, essv6409095, essv5952161, essv5492553, essv6102680, essv5447597, essv6318766, essv5914482, essv6578364, essv6561512, essv5714206, essv5608873, essv6574003, essv5694197, essv6557391, essv5911025, essv5913408, essv5841637, essv6429010, essv6097690, essv5621290, essv5629826, essv6161256, essv5969260, essv6443052, essv5970908, essv5768293, essv6002203, essv5524231, essv5535333, essv5905540, essv6184272, essv5760799, essv5935741, essv6276914, essv6325485, essv5909178, essv6466243, essv6355858, essv5841236, essv5409622, essv6370166, essv6425047, essv6014016, essv5547893, essv6176378, essv5819510, essv6218228, essv5688909, essv6562377, essv5985857, essv6160614, essv6487587, essv6205501, essv5816193, essv5465153, essv6142722, essv6457236, essv5924649, essv5734435, essv5614393, essv6424865, essv6189022, essv5962927, essv6117467, essv5492677, essv5728381, essv5956444, essv5980259, essv6365675, essv5456696, essv6157426, essv5683200, essv5968308, essv5811965, essv6418273, essv6120188, essv6589192, essv6533123, essv6282189, essv6477506, essv6581634, essv6006107, essv5888085, essv6085808, essv5773504, essv6125065, essv6163294, essv6085012, essv6405482, essv6193147, essv6141511, essv6283187, essv6150859, essv5846209, essv6495882, essv5877976, essv5928462, essv5936608, essv5418474, essv6254675, essv5529689, essv6215293, essv6289815, essv5571695, essv5998625, essv5943999, essv5578627, essv6344767, essv5702545, essv6579448, essv6142160, essv5653358, essv6477657, essv5712777, essv5423893, essv6266611, essv5875523, essv5792990, essv6563532, essv6236911, essv6104594, essv6048526, essv5500680, essv6477883, essv5752466, essv6098708, essv6358423, essv6554413, essv6036439, essv5775295, essv5854756, essv6259037, essv5404749, essv5571686, essv6368751, essv5942350, essv5433183, essv5580819, essv6398937, essv6441342, essv6320797, essv6505319, essv6103665, essv6581919, essv5494116, essv6303958, essv5608286, essv5966509, essv6346876, essv6343346, essv5743986, essv5945390, essv5953903, essv5767687, essv5641307, essv6063665, essv6242492, essv6296213, essv6458036, essv5589847, essv6293393, essv6587738, essv5865500, essv6160058, essv6260703, essv6530170, essv6439447, essv5431761, essv5986151, essv6567028, essv5553597, essv5670166, essv5880129, essv5815055, essv6153448, essv5909705, essv6451734, essv6133621, essv6332033, essv5771455, essv6208129, essv5730353, essv6470383, essv5999896, essv5998622, essv5677707, essv5937159, essv6451444

Samples

HG00626, NA12383, HG00189, HG00650, HG00542, NA19700, HG00592, HG01521, HG00536, HG00608, NA18621, NA18947, HG00671, NA18592, NA12414, NA18561, NA19704, HG01066, NA18999, NA20802, NA20512, NA18603, NA19819, NA19777, NA12340, NA18530, NA18606, NA18616, HG01051, NA18633, NA18602, HG00693, NA18627, HG00663, NA18563, NA19660, NA19076, NA19005, NA18597, HG00702, NA19723, NA18635, NA18567, NA19916, HG01492, HG00634, NA18942, HG00736, NA11918, NA07347, HG00346, NA18582, NA20768, NA19054, NA18498, NA20336, HG00537, NA20541, NA18611, HG00281, NA20539, NA19651, HG00120, HG00683, NA06984, NA20812, NA18560, NA19075, NA18617, HG00422, HG00705, NA18986, NA19087, HG01440, HG00309, NA19722, NA19002, NA18990, NA20342, NA18973, HG00253, NA20755, NA18638, HG00464, NA20818, NA18614, HG00543, HG00149, NA18544, NA18605, HG00443, NA19082, NA19056, NA19670, NA20524, HG00557, NA19077, HG00428, HG00732, HG00577, HG00657, NA19391, HG00475, NA19717, NA19236, HG00436, HG00584, HG00533, HG00583, NA19081, HG00500, HG00275, NA20506, NA18871, NA18948, NA18534, NA18630, HG00692, NA19064, NA19654, NA18566, HG00651, NA19000, HG00250, NA19655, NA18626, HG00404, HG00531, NA20581, HG01197, NA18532, NA06989, NA18963, HG00704, NA19756, NA18570, NA18945, NA18541, NA19012, NA18576, NA18608, NA19685, NA19003, HG00258, HG00611, NA18632, HG00476, NA18542, NA18535, NA11881, NA18543, NA18559, NA19712, NA18564, NA19747, HG00565, HG00366, NA18628, HG01551, HG00734, NA18941, NA20785, NA20527, HG01375, HG00473, HG00607, NA19679, NA19467, HG01137, HG00256, HG00662, HG00418, NA18615, HG01342, NA06986, HG00620, NA19818, NA19078, HG00707, HG00672, HG00513, NA18631, NA19223, NA19060, NA18987, NA12749, HG00656, NA19716, HG00267, HG00123, HG00698, NA20826, HG00343, NA20528, NA18552, NA18983, HG01251, HG00595, HG01464, NA19129, HG01111, NA18968, NA18624, NA19463, NA18522, HG01097, NA18549, NA20754, NA19074, NA18622, HG00437, NA18577

Known Genes

ABCA1

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2675308

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	212
Observed Complex	0
Frequency	n/a