Variant Details

Variant: esv2674945

Internal ID

9941050

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr6:142944179..142947185	hg38	UCSC Ensembl
Outer	chr6:142943808..142947655	hg38	UCSC Ensembl
Inner	chr6:143265316..143268322	hg19	UCSC Ensembl
Outer	chr6:143264945..143268792	hg19	UCSC Ensembl

Cytoband

6q24.2

Allele length

Assembly	Allele length
hg38	3848
hg19	3848

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv1158e199

Supporting Variants

essv5655702, essv5692452, essv5635743, essv5773453, essv6417273, essv5763297, essv5984502, essv5756925, essv5446132, essv6491368, essv6572024, essv5477912, essv6527251, essv6403500, essv5610702, essv5950700, essv5689528, essv6288187, essv5491378, essv5916676, essv6034585, essv6028762, essv5789229, essv6151608, essv5736865, essv6043302, essv5546215, essv6248242, essv6566177, essv6527952, essv6587639, essv5450330, essv6348809, essv6160291, essv5577901, essv5673560, essv5713131, essv5965406, essv5470503, essv5537848, essv5683315, essv5401943, essv6573785, essv6170970, essv6276695, essv6206718, essv6539239, essv5647319, essv5519963, essv5522579, essv6095257, essv5693714, essv5587635, essv5662683, essv6364834, essv5506627, essv6545260, essv5984481, essv5497510, essv6099366, essv6202364, essv6235077, essv6133729, essv6317510, essv6224181, essv5431855, essv6445282, essv5475911, essv6452096, essv6368472, essv6253559, essv5467670, essv5628718, essv6338285, essv6389969, essv6416177, essv6088183, essv6258053, essv6466815, essv6427582, essv6565819, essv5850495, essv5620342, essv6093678, essv6410458, essv5425805, essv5759416, essv5958567, essv5906931, essv6288625, essv5494247, essv6554345, essv5579452, essv5505998, essv5924966, essv5632437, essv5625697, essv5669525, essv6006233, essv6590208, essv5698389, essv5762459, essv5402433, essv6464910, essv5450797, essv6473308, essv5429036, essv5732128, essv5897482, essv5922216, essv6159857, essv6371547, essv6438879, essv5820778, essv6363121, essv5875936, essv5726381, essv6170265, essv5773736, essv6274400, essv6170767, essv6411753, essv6487040, essv6543137, essv5869200, essv6339563, essv6297862, essv6054601, essv5636553, essv6009325, essv5918126, essv6032835, essv6243313, essv5530173, essv5553551, essv6404691, essv6334967, essv5694707, essv6409680, essv5858142, essv5897347, essv5533576, essv5848109, essv6018449, essv5726726

Samples

HG00626, HG00403, HG00650, HG00442, HG00536, HG00608, HG00671, HG00361, HG00524, HG00315, HG00318, HG00181, HG00699, HG00179, HG00449, HG00654, HG00693, HG00337, HG00327, HG00271, HG00663, HG00589, HG00272, HG00501, HG00702, HG00689, HG00448, HG00330, HG00634, HG00610, HG00346, HG00369, HG00270, HG00334, HG00185, HG00537, HG00590, HG00512, HG00281, HG00277, HG00683, HG00335, HG00325, HG00534, HG00422, HG00705, HG00309, HG00182, HG00427, HG00338, HG00326, HG00178, HG00323, HG00530, HG00419, HG00464, HG00543, HG00313, HG00443, HG00268, HG00266, HG00183, HG00282, HG00596, HG00557, HG00328, HG00428, HG00653, HG00701, HG00657, HG00475, HG00368, HG00436, HG00556, HG00320, HG00584, HG00533, HG00583, HG00344, HG00500, HG00275, HG00619, HG00708, HG00692, HG00635, HG00324, HG00284, HG00273, HG00651, HG00690, HG00404, HG00373, HG00531, HG00479, HG00331, HG00684, HG00613, HG00525, HG00321, HG00276, HG00704, HG00463, HG00611, HG00476, HG00336, HG00285, HG00625, HG00366, HG00353, HG00580, HG00375, HG00357, HG00278, HG00473, HG00607, HG00319, HG00662, HG00418, HG00620, HG00339, HG00269, HG00707, HG00672, HG00614, HG00513, HG00578, HG00478, HG00421, HG00329, HG00656, HG00342, HG00310, HG00186, HG00698, HG00280, HG00343, HG00377, HG00372, HG00274, HG00595, HG00472, HG00628, HG00345, HG00437, HG00581

Known Genes

HIVEP2

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2674945

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	145
Observed Complex	0
Frequency	n/a