A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2674577



Internal ID2907664
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:98737222..98737530hg38UCSC Ensembl
chr10:100496979..100497287hg19UCSC Ensembl
Cytoband10q24.2
Allele length
AssemblyAllele length
hg38309
hg19309
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5609091, essv6023472, essv6280756, essv6566005, essv6342017, essv5979368, essv6144967, essv5688091, essv5540044, essv6151307, essv5416363, essv5811480, essv6541328, essv6574781, essv6168762, essv6444642, essv5570496, essv5434450, essv5562998, essv6109332, essv6361230, essv5777634, essv5768687, essv6543215, essv5808571, essv5537857, essv6045614, essv6095474, essv6336314, essv5514327, essv5764358, essv6284012, essv5564236, essv6025833, essv6312741, essv5814579, essv5967568, essv6493806, essv6454637, essv6384181, essv5876931, essv6436391, essv5639567, essv5898665, essv6586577, essv6350185, essv5656701, essv5637377, essv5762814, essv5423177, essv6386527, essv6554268, essv5405969, essv6262496, essv6171563, essv5502137, essv6328162, essv5885983, essv5576609, essv5875643, essv5585062, essv5824422, essv6593389, essv6551021, essv6318846, essv6133070, essv6217995, essv5812133, essv6101093, essv5841384, essv5660432, essv5859187, essv5911863, essv6476458, essv5663390, essv6135222, essv6106121, essv6473790, essv6295042, essv6052178, essv6050431, essv6488575, essv5729818, essv5779709, essv5586967, essv6544320, essv5965396, essv5461723, essv6218235, essv5441438, essv5530460, essv6112683, essv6151755, essv5910703, essv6265296, essv6564053, essv6564756, essv6247215, essv6537209, essv6261900, essv6229427, essv5664555, essv5680069, essv6085103, essv6322573, essv6386870, essv5834386, essv5641180, essv6545556, essv6201615, essv5571979, essv5531007, essv6244583, essv6356253, essv5727120, essv5870380, essv5903181, essv6400389, essv5799034, essv6210404, essv6535824, essv5622528, essv6469578, essv5767525, essv6548214, essv5886150, essv5647774, essv5720309, essv6230684, essv6299971, essv5605938, essv6264588, essv5655072, essv6316345, essv6321728, essv5883688, essv6512651, essv5785342, essv5918371, essv6196590, essv5711917, essv6354709, essv6371282, essv6480211, essv6478506, essv6094425, essv6595421, essv5668528, essv5600168, essv6398589, essv6558397, essv6115592, essv6425501, essv6598211, essv5464690, essv5851233, essv5534756, essv5635362, essv5918257, essv5726251, essv6069380, essv5686598, essv5650120, essv5653607, essv5980690, essv5996014, essv6276577, essv6011897, essv6186347, essv5499627, essv5576368, essv6447854, essv5865503, essv5726693, essv5726965, essv5951213, essv6335520, essv6351865, essv5580968, essv6095050, essv6103263, essv6163006, essv6334192, essv6392519, essv6437037, essv5479012, essv6256148, essv5743957, essv5689423, essv6499277, essv5838278, essv6186522, essv6123552, essv6463163, essv5978171, essv5420739, essv6349892, essv6089127, essv6461040, essv6462649, essv5661933, essv6233485, essv5506687, essv5681258, essv6190835, essv5812694, essv5450963, essv5883216, essv6009509, essv5478663, essv5593256, essv5423433, essv5518906, essv5978924, essv6260726, essv5688458, essv5824854, essv5949629, essv5670566, essv6400073, essv6476975, essv5996018, essv6387549, essv5885631, essv6048809, essv5473619, essv5897581, essv6182327, essv6248736, essv6369103, essv6246273, essv6410717, essv6006186, essv6339342, essv6514737, essv5441348, essv6591657, essv5801681, essv5814287, essv6580259, essv5876269, essv6163148, essv5769012, essv5921544, essv6551029, essv6309585, essv5809065, essv6374143, essv6082300, essv5941592, essv5401074, essv6540909, essv6497990, essv6386211, essv6564801, essv6445179, essv5443011, essv6565645, essv6567347, essv5894094, essv6248756, essv5901487, essv5777254, essv6075122, essv5861721, essv5956923, essv5639916, essv5752991, essv5648809, essv5599532, essv5993701, essv6209466, essv5804171, essv5463278, essv6104901, essv5862531, essv5743688, essv5809864, essv5814749, essv6101369, essv5712578, essv5743344, essv5853144, essv5856720, essv5486002, essv6009749, essv6494703, essv5778849, essv6503706, essv6207599, essv5730125, essv6366003, essv5958001, essv6011292, essv6298182, essv6428457, essv5606609, essv6456362, essv5868585, essv5984819, essv6058270, essv6164769, essv5731781, essv6445517, essv5658039, essv6114268, essv6523018, essv5769708, essv6204227, essv5830346, essv6059903, essv5480016, essv5520389, essv6552198, essv5782955, essv6555922, essv5446396, essv5706100, essv6068236, essv5823648, essv5525633, essv5549504, essv5715796, essv5564737, essv5496340, essv6523160, essv5503589, essv6358969, essv5607021, essv6252981, essv6342246, essv6158851, essv6126484, essv5396150, essv6328319, essv5479207, essv6147154, essv6284261, essv6026395, essv6050576, essv6404646, essv5625590, essv6073207, essv5421774, essv6554802, essv5602624, essv5820145, essv5672338, essv6476352, essv6071366, essv6585846, essv6465680, essv6009701, essv5894553, essv6397364, essv6576888, essv5859683, essv5673033, essv6527002, essv6503304, essv5881562, essv6128811, essv5513276, essv6489976, essv6232072, essv5797916, essv6462712, essv6212625, essv5601389, essv5857132, essv5864164, essv5879075, essv5795882, essv5913553, essv5885944, essv6528993, essv5469806, essv6033616, essv5507496, essv5634815, essv6045590, essv5421157, essv6571023, essv5458971, essv5901975, essv6254422, essv5739033, essv5884020, essv6225157, essv6425798, essv5831835, essv6210247, essv5430830, essv6119407, essv5815016, essv6032492, essv6096960, essv6299390, essv6252592, essv5645852, essv6214584, essv5942362, essv6402038, essv6349125, essv5888716, essv5767208, essv6027689, essv6061697, essv5447136, essv5912641
SamplesHG01441, NA19012, NA18621, HG00309, NA18870, NA12154, HG00537, HG00252, NA18605, NA07347, NA19712, HG00257, NA18616, HG00182, NA18951, HG00619, NA18534, HG01353, NA18530, NA18535, NA18630, HG00418, HG01519, NA12286, HG00328, HG00437, HG00500, HG00112, HG00186, HG00464, NA12347, NA19093, HG00565, HG00160, NA19435, HG00463, HG00657, NA18516, NA19359, HG00614, HG00189, HG00577, HG01082, NA18953, HG01488, HG00428, NA18947, HG00542, NA19449, HG00148, HG01350, HG00739, NA18541, NA18546, HG00683, HG00334, HG00581, HG00187, HG00404, NA19651, HG01134, NA19257, NA19682, HG00253, HG00699, NA20322, NA18557, NA19472, NA18943, NA18950, HG01171, HG00353, NA18949, NA12414, HG01107, NA19463, HG00556, HG01148, NA12763, HG00346, HG01384, NA18967, NA18627, NA19076, HG01375, NA19390, HG00421, HG01378, NA18635, NA19917, NA20811, NA18536, NA19675, NA19443, NA18623, HG01061, NA18617, NA18990, NA18592, NA19083, NA19088, HG00315, NA18956, HG00338, NA18609, NA18637, NA11995, HG00634, HG00284, HG01187, NA19457, NA12777, NA19082, NA20341, NA19000, NA19055, NA19247, NA19360, NA19313, NA19786, HG01097, NA18633, HG00653, HG01191, HG00629, NA12348, NA18498, NA19716, NA20790, NA18486, NA18968, NA18986, NA19238, NA12275, NA19005, NA19657, NA19002, NA18558, NA18977, HG00239, NA18941, NA19664, HG00672, HG01069, HG01356, NA20814, HG00249, HG00478, NA18564, NA18942, NA18961, HG00116, NA19347, NA20774, HG01080, HG01351, NA19332, HG00740, NA18613, NA20797, HG00513, NA19707, HG00525, NA18562, NA19074, NA19159, HG01383, HG00377, NA18579, NA18974, NA18985, NA19789, NA19462, HG00589, NA18606, NA19777, NA18543, NA18940, HG01094, NA18987, NA18999, NA20525, HG00427, NA18552, NA19138, NA19729, NA20534, NA20756, HG00443, NA18599, NA19391, NA19723, HG00611, NA20276, HG00650, NA06984, NA18538, NA19394, NA18565, HG00663, NA12889, NA19116, NA18631, NA18560, NA18989, HG00580, NA19719, NA19747, NA19434, HG00448, NA19755, HG00608, NA19099, HG01390, NA18614, NA19452, NA20507, HG00530, NA12003, NA19064, NA19770, HG00123, NA19749, HG00281, NA18944, HG00656, NA12546, NA12842, NA19655, HG01366, NA19732, HG00422, NA20543, HG00708, NA20758, HG01251, NA19070, NA11932, NA18611, HG00566, HG01125, NA11829, NA19756, HG00251, NA19240, HG00320, HG01498, HG00275, HG00324, HG00625, HG00690, NA12717, NA18532, NA18549, NA18574, NA18853, HG00442, HG01374, HG00473, HG01462, NA19079, NA19381, HG00684, HG01377, NA18615, NA19758, HG00336, HG00476, NA20502, NA19087, NA20517, NA19092, HG00702, HG00704, NA19200, NA19750, HG00278, NA19779, NA18519, NA19065, NA19058, NA19746, HG00531, NA18980, HG01354, NA18553, HG00313, NA19445, NA19625, HG01359, HG00318, HG00536, HG00607, NA19321, NA20522, HG00344, NA20785, NA18561, NA20506, NA19404, HG00127, NA18975, NA20516, HG00369, NA18612, NA19783, NA20508, HG00449, NA19060, NA18550, NA18570, NA19003, NA19072, HG00707, NA18948, NA12813, HG00117, HG01492, NA18972, NA20816, NA20342, NA18608, NA20786, NA18542, NA19782, NA19210, HG00106, HG00701, HG01204, HG00651, NA19004, NA19678, HG00557, HG00578, HG00331, NA18965, NA19084, NA19780, NA18873, NA18626, NA19776, NA19654, HG00247, NA18632, HG00342, HG00635, NA19762, HG00543, NA18559, HG00321, NA19428, NA20533, NA18624, HG01140, NA19054, HG01456, NA19059, NA20515, HG00472, NA18566, NA11994, NA19057, NA19660, HG00140, HG00638, NA12155, NA18576, NA18960, NA18563, NA18618, NA07357, NA19722, HG00231, NA20783, NA18991, NA20801, HG01047, HG00330, NA18638, NA19066, NA19774, NA20765, HG00178, HG00419, HG00258, NA18976, HG01136, NA19835, NA18982, NA19681, HG00254, NA19056, NA19663, NA19679, HG00403, NA12830, HG00584, HG01497, HG00436, HG00620, HG00124, NA12046, NA19785, HG00108, NA18537, NA19759, NA18572, NA20536, HG00268, NA19393
Known GenesHPSE2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2674577
Frequency
Sample Size1151
Observed Gain0
Observed Loss410
Observed Complex0
Frequencyn/a


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