Variant Details

Variant: esv2674456

Internal ID

9593875

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chrX:3688293..3688600	hg38	UCSC Ensembl
	chrX:3606334..3606641	hg19	UCSC Ensembl

Cytoband

Xp22.33

Allele length

Assembly	Allele length
hg38	308
hg19	308

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv1393e199

Supporting Variants

essv6574705, essv5824681, essv5851219, essv5486913, essv5649508, essv5495398, essv6566574, essv5789678, essv6431505, essv5463886, essv5679579, essv5749658, essv5950745, essv6373781, essv6069002, essv6539546, essv6072755, essv6256481, essv5813060, essv5862599, essv5587206, essv6043603, essv6080213, essv5755105, essv5798304, essv5432154, essv5776807, essv6594735, essv5408951, essv6005221, essv6092275, essv6524998, essv5713136, essv6370660, essv5519675, essv5678038, essv5989257, essv5688208, essv6413202, essv6056267, essv6287503, essv5438229, essv6286362, essv6366680, essv5863681, essv5711432, essv6588243, essv6385589, essv5849105, essv5974336, essv6443446, essv5611924, essv6480313, essv6222045, essv6024413, essv5749009, essv6058359, essv5595933, essv5812957, essv6021289, essv5821588, essv6036965, essv5420387, essv5555608, essv6178436, essv6287587, essv5830635, essv5840421, essv5640564, essv6504941, essv6150578, essv5943427, essv6138451, essv6333452, essv6570448, essv6337261, essv6095287, essv5559650, essv6221467, essv6344904, essv5704152, essv5510285, essv6190887, essv5853102, essv6430077, essv6069869, essv5972278, essv5861352, essv6557779, essv5588609, essv6110562, essv6293372, essv5956157, essv6277641, essv5760657, essv5743105, essv5687201, essv5983940, essv6201926, essv5872422, essv6505814, essv5601711, essv5924870, essv5866249, essv5748969, essv5924105, essv6371559, essv5948013, essv5953440, essv6596740, essv6294838, essv5528254, essv6176748, essv6333962, essv5568507, essv5938913, essv5650325, essv6462081, essv5969716, essv5987983, essv5658944, essv5709319, essv5787648, essv5695706, essv5603035, essv5533188, essv6049864, essv5885764, essv6578993, essv5829025, essv5628109, essv5497874, essv5834553, essv6569885, essv6586607, essv5613289, essv5606450, essv6086353, essv5441496, essv5823058, essv6457682, essv5847464, essv6363369, essv6031096, essv6453576, essv5839192, essv6188832, essv5953692, essv6055706, essv5514963, essv5582675, essv6002108, essv6478280, essv6575342, essv6459843, essv5586251, essv5834821, essv5873456, essv5919292, essv5628502, essv5831371, essv5773350, essv6543142, essv5487174

Samples

HG00626, NA12717, HG00442, HG00592, HG01356, NA19703, HG00608, HG00142, HG00671, NA19066, NA19399, HG00187, NA18565, NA18980, HG01079, HG00699, NA18545, NA19377, NA18959, NA18616, HG00654, NA18633, NA12750, NA19067, NA18602, HG00693, NA18627, NA12341, HG00663, NA19379, NA18940, NA18550, HG01366, NA18597, NA18595, HG00702, HG00448, HG00173, NA18619, HG00330, NA12348, NA18960, HG00610, NA18574, NA18582, HG01354, NA19088, NA18571, NA12287, NA19138, HG01365, HG00334, NA18964, HG00590, NA18611, HG00512, NA12282, HG01069, HG01067, NA06984, HG00325, NA18560, NA18617, HG00705, NA18990, NA18557, NA18985, NA20757, HG00253, NA20515, NA18539, NA18638, NA19007, HG00543, HG01183, HG00154, HG00629, NA19082, HG01187, HG01171, HG00282, NA19403, HG00328, HG00245, NA19077, HG00577, HG00657, HG00584, HG00583, HG00500, NA18579, NA18630, HG00708, HG00692, NA19064, NA18537, HG00324, HG01073, NA18573, HG00651, HG00250, NA18626, HG00690, HG00404, HG00479, HG00684, NA18532, NA19009, NA18555, HG00463, HG00246, NA18634, NA18541, HG01204, NA19012, NA18608, HG00258, HG00476, NA20773, NA18542, HG00336, NA19834, NA18952, NA18559, NA19712, NA19434, NA18564, HG00565, NA19072, HG00136, NA07051, NA19010, HG01357, NA19835, HG00473, HG00237, NA20504, HG01108, NA20281, NA12763, HG00662, NA18615, HG01489, HG00620, HG00339, NA19328, HG00707, HG00672, HG00478, HG00259, HG01055, NA18636, NA12830, HG00280, NA19080, NA18552, HG00628, NA19463, NA18623, NA20754, HG01061, HG00437, NA18965, NA18577

Known Genes

PRKX

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2674456

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	164
Observed Complex	0
Frequency	n/a