Variant Details

Variant: esv2674182

Internal ID

9593601

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr11:125426616..125426619	hg38	UCSC Ensembl
Outer	chr11:125426462..125426769	hg38	UCSC Ensembl
Inner	chr11:125296515..125296512	hg19	UCSC Ensembl
Outer	chr11:125296358..125296665	hg19	UCSC Ensembl

Cytoband

11q24.2

Allele length

Assembly	Allele length
hg38	308
hg19	308

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv5431974, essv6030793, essv5650421, essv6417227, essv6085733, essv6073404, essv5852441, essv5846986, essv5493860, essv5966456, essv6177349, essv5701458, essv6278584, essv6598097, essv5761781, essv5866072, essv5589793, essv6556747, essv5625529, essv5411870, essv6262252, essv6010774, essv5673197, essv5525242, essv6257712, essv5427935, essv5466418, essv5675240, essv6279123, essv5625628, essv6500629, essv5733994, essv5555579, essv5831341, essv5831632, essv6232146, essv5814290, essv5603566, essv5809769, essv5491915, essv6059674, essv5782683, essv6495957, essv5843266, essv5663403, essv5668387, essv5492798, essv5632103, essv6431209, essv6433822, essv6261387, essv5651990, essv5555911, essv5632588, essv6093236, essv6102365, essv5891691, essv6594180, essv5717849, essv6063451, essv5516661, essv6319303, essv5679893, essv5629313, essv6279895, essv5811482, essv5994487, essv5700655, essv5684582, essv5679676, essv5956098, essv6144437, essv5786104, essv5660583, essv6205906, essv6230784, essv6235654, essv5845026, essv6130277, essv5418810, essv6197727, essv6339039, essv5658345, essv6001387, essv6586032, essv5649594, essv5930630, essv5696755, essv6299970, essv6575543, essv6125700, essv5657396, essv5818984, essv6560078, essv5429354, essv6459796, essv6378586, essv6548435, essv5778626, essv6063577, essv6519060, essv6186064, essv5603570, essv5988907, essv5398128, essv6499208, essv5778040, essv6449694, essv5763057, essv6514392, essv5699515, essv6437511, essv6314814, essv5788391, essv5832650, essv5847206, essv6267151, essv6327341, essv5903795, essv6153171, essv5515172, essv6134380, essv5987912, essv5919892, essv5665150, essv5866717, essv6334720, essv6378420, essv6579185, essv5733773, essv5721769, essv5825507, essv6163769, essv6128505, essv5979454, essv6041997, essv5538522, essv6526133, essv5467073, essv5433893, essv6284388, essv6529743, essv5602718

Samples

HG01060, HG00442, HG01173, HG00536, HG00608, NA18621, HG00671, HG00524, HG01052, HG01079, NA11933, HG00257, HG01389, HG01374, HG00315, HG00699, NA12004, HG00449, HG01051, HG00693, HG00337, HG00327, HG00271, HG00663, HG01350, NA18550, HG01070, HG00501, HG00702, HG00689, HG00346, HG01083, NA19138, HG00369, HG01365, HG00334, HG00537, HG00590, NA18611, NA19404, HG00139, HG01080, HG01067, HG00683, HG00335, HG01072, HG00232, HG00422, HG00705, HG01440, HG00427, HG00338, HG01133, HG00326, HG00419, HG00253, HG00108, HG00260, HG01353, HG00543, HG00137, HG01136, HG00154, NA18613, HG00443, HG00268, HG01187, HG01171, HG00557, HG00328, NA12003, HG00653, HG00475, HG00436, HG00320, HG00584, HG00533, HG00344, NA18637, HG00263, NA18572, NA18534, HG00619, HG00708, HG00692, HG01047, HG00284, HG01073, HG00273, HG00479, NA18499, NA18532, HG00525, HG00321, NA12827, HG00276, HG00704, HG00463, NA18570, HG01107, NA19436, NA18576, NA18608, NA18542, NA20801, HG00336, HG00285, NA18543, NA18559, HG00580, HG00375, HG00136, NA07051, HG01357, HG01375, HG00473, HG00237, HG00319, HG00662, HG00418, NA18610, NA19759, HG00672, HG00111, HG00478, HG00421, HG00656, NA18636, NA12830, HG00310, HG00280, HG00343, NA20528, HG00274, HG01377, HG00472, HG01378, NA18624, HG00345, NA18623, NA18612, HG01437, NA18562

Known Genes

PKNOX2

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2674182

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	143
Observed Complex	0
Frequency	n/a