A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2674065



Internal ID9593484
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32659439..32680045hg38UCSC Ensembl
Outerchr6:32658868..32680615hg38UCSC Ensembl
Innerchr6:32627216..32647822hg19UCSC Ensembl
Outerchr6:32626645..32648392hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3821748
hg1921748
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1112e199
Supporting Variantsessv5970920, essv6407498, essv6477083, essv6399943, essv6048234, essv5785951, essv5667346, essv5653996, essv5947821, essv5482607, essv5449471, essv5815858, essv5835865, essv6266255, essv5595280, essv5580857, essv5460327, essv5468023, essv5929479, essv5413178, essv6198217, essv5577326, essv6333306, essv5454377, essv5630849, essv5553358, essv6344721, essv5611032, essv6588146, essv6397520, essv6276440, essv6556361, essv6021305, essv5594540, essv5908926, essv6172857, essv5397945, essv5631833, essv5993088, essv6152149, essv5446085, essv6365391, essv6531236, essv5843590, essv6512711, essv5782307, essv6530589, essv6337916, essv6328911, essv5615970, essv6277015, essv5822221, essv5461937, essv6296541, essv6525320, essv6199448, essv6372982, essv5735315, essv5831656, essv5493705, essv5469375, essv5488670, essv5570805, essv5846603, essv6289514, essv6477866, essv5904631, essv6334387, essv6456231, essv6407091, essv5493384, essv6478649, essv6007047, essv5764001, essv6306340, essv5652163, essv5573759, essv6097074, essv6532442, essv5919897, essv6144225, essv6511108, essv5905689, essv5628049, essv5502660, essv6403744, essv5754095, essv5569464, essv5487301, essv6394847, essv5688570, essv5936045, essv5404875, essv5763652, essv5622579, essv6093595, essv5434463, essv6331971, essv6387461, essv6582405, essv6118098, essv6084026, essv6382904, essv5856169, essv5811781, essv6122253, essv6031305, essv5934127, essv6538099, essv6473919, essv6322699
SamplesHG00650, HG00442, NA19058, HG00536, HG00608, NA18947, HG00671, NA19066, HG00559, HG00524, NA18980, NA18999, NA19057, HG00566, HG00449, NA19067, HG00693, HG00663, NA19068, NA19076, NA18944, NA18940, HG00589, HG00501, HG00702, HG00689, HG00448, NA18982, HG00634, NA18960, NA18942, HG00610, NA19088, HG00537, HG00590, HG00512, HG00683, NA18977, HG00534, HG00422, NA18986, HG00427, NA18985, NA18973, HG00530, HG00419, HG00464, NA19007, NA18951, HG00629, HG00443, NA19070, NA19056, HG00596, HG00428, NA18956, HG00701, HG00657, HG00436, HG00556, HG00584, HG00583, NA19081, HG00500, HG00619, NA18981, HG00708, HG00692, NA19064, HG00651, NA19084, HG00690, HG00404, HG00531, HG00684, HG00613, HG00525, NA19059, NA19009, HG00704, HG00463, NA19012, NA18953, HG00611, HG00476, NA18961, HG00565, HG00580, NA19010, HG00473, NA18943, HG00418, HG00620, HG00672, HG00614, HG00578, HG00478, NA19060, HG00421, NA18987, HG00656, NA18983, HG00595, HG00472, NA18989, NA19004, HG00628, NA19063, NA19074, HG00437, NA18965
Known GenesHLA-DQB1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2674065
Frequency
Sample Size1151
Observed Gain0
Observed Loss111
Observed Complex0
Frequencyn/a


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