Variant Details

Variant: esv2673642

Internal ID

9939747

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chrX:92598717..92654623	hg38	UCSC Ensembl
Outer	chrX:92598346..92654993	hg38	UCSC Ensembl
Inner	chrX:91853716..91909622	hg19	UCSC Ensembl
Outer	chrX:91853345..91909992	hg19	UCSC Ensembl

Cytoband

Xq21.32

Allele length

Assembly	Allele length
hg38	56648
hg19	56648

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6229928, essv5769008, essv5619233, essv5431480, essv6177086, essv5525901, essv6301731, essv6055074, essv5972702, essv6409689, essv5837905, essv6345722, essv6464256, essv6221020, essv6255732, essv5650871, essv5633764, essv5929814, essv5887028, essv6405021, essv6498418, essv5431252, essv6223343, essv5733645, essv6278014, essv6506898, essv5764696, essv6046944, essv6299888, essv5809081, essv6334997, essv5535338, essv5646621, essv6133004, essv6361501, essv5987823, essv6247572, essv5507305, essv5502155, essv6332769, essv6481344, essv5830807, essv6534307, essv6437549, essv6061606, essv5830437, essv5572861, essv6484114, essv6586478, essv5684014

Samples

NA19204, NA18507, NA18917, NA18486, NA18504, NA19190, NA19098, NA18510, NA19107, NA19171, NA18519, NA19119, NA18923, NA19198, NA19131, NA19138, NA18498, NA19130, NA18874, NA18868, NA19137, NA19207, NA19189, NA18520, NA19209, NA18908, NA18867, NA19200, NA18934, NA19152, NA19236, NA18516, NA18910, NA18871, NA18856, NA18853, NA18523, NA19160, NA19108, NA19256, NA19144, NA18501, NA19248, NA19223, NA18873, NA19213, NA19129, NA18522, NA18487, NA19153

Known Genes

PCDH11X

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2673642

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	50
Observed Complex	0
Frequency	n/a