A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2672916



Internal ID9592335
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32643239..32657645hg38UCSC Ensembl
Outerchr6:32642568..32658315hg38UCSC Ensembl
Innerchr6:32611016..32625422hg19UCSC Ensembl
Outerchr6:32610345..32626092hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3815748
hg1915748
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1110e199
Supporting Variantsessv6354950, essv5631537, essv6211451, essv6587376, essv5896902, essv5694560, essv5468984, essv6232060, essv6351279, essv5981289, essv6336612, essv5564215, essv6388980, essv5502488, essv5667872, essv5574120, essv5491867, essv5501036, essv5665994, essv5435259, essv5530202, essv6194020, essv6156225, essv6196988, essv5910771, essv5800948, essv6593175, essv6189344, essv5821247, essv5720759, essv6035838, essv5802130, essv5755855, essv5796195, essv5408496, essv5880275, essv5399863, essv6510770, essv5699810, essv5568704, essv5976617, essv6106835, essv5584597, essv5760203, essv6459655, essv6103406, essv5838006, essv6317211, essv5765327, essv5949060, essv5958211, essv6570622, essv6052157, essv6581566, essv5855595, essv6166334, essv5785002, essv5941391, essv5786153, essv6085640, essv5527146, essv5941904, essv5753009, essv5561641, essv5803969, essv5863637, essv6526239, essv6362108, essv5905976, essv6275748, essv5412927, essv6302039, essv5395740, essv6185850, essv5485513, essv5758802, essv5951666, essv6032488, essv6408615, essv5502087, essv6133904, essv6504547, essv6483986, essv5954047, essv6094316, essv5537495, essv6016945, essv5781454, essv6419301, essv6244385, essv5940566, essv6031936, essv5574223, essv6541823, essv5824209, essv6477133, essv6355335, essv6062602, essv5675455, essv6244692, essv5616904, essv6573988, essv6398133, essv5834411, essv5850148, essv6323668, essv5662029, essv6576759, essv5423976, essv5868992, essv6082147, essv5785285, essv6501159, essv5905371, essv5944696, essv6397718, essv5664706, essv6580038, essv6193538, essv6463178, essv6464076, essv5810606, essv6431897, essv5907014, essv5870546, essv6198574, essv6010729, essv5695201, essv6597728, essv6246004, essv5504532, essv6195266, essv6160892, essv6506752, essv5743541, essv5760522, essv5830049, essv5863275, essv5890391, essv5752364, essv5425935, essv5731161, essv6582593, essv6470310, essv6127644, essv5652123, essv6282772, essv5935988, essv5921618, essv5487147, essv6386311, essv6411915, essv6334132, essv6233000, essv5556342, essv5867764, essv6479276, essv6126042, essv5777193, essv5713533, essv6516931, essv5725300, essv5644022, essv5460056, essv6415651, essv6284040, essv6457516, essv6472369, essv6560266, essv5529996, essv5845978, essv6228707, essv6010486, essv5572611, essv6028370, essv6075434, essv5636728, essv5769019, essv6309397, essv5687845, essv5441678, essv6078251, essv6545309, essv5651235, essv6466431, essv6401467, essv6236552, essv6241709, essv6568208, essv6036580, essv5667966, essv6387538, essv6561432, essv6455695, essv5835381, essv5828255, essv6194094, essv6419829, essv6040944, essv6394036, essv6031506, essv5903600, essv5504151, essv6345270, essv6311544, essv6146352, essv6102872, essv5482702, essv6559831, essv6423716, essv5709948, essv6310389, essv6173130, essv5799772, essv6450756, essv5884460, essv5641185, essv6248912, essv5611608, essv5936597, essv6092019, essv5395956, essv5829884, essv6041977, essv6499246, essv6370127, essv5750006, essv5740940, essv6119125, essv6400132, essv6138995, essv6092400, essv5682772, essv6498321
SamplesNA20588, NA19058, HG01462, NA18621, NA20766, NA20508, NA19066, NA20783, NA18565, NA20514, NA20816, NA20752, NA18999, NA20802, NA20512, NA18616, NA20517, HG01461, NA18633, NA19067, NA18602, NA18627, NA20814, HG01350, NA18597, NA20589, NA18567, NA20795, NA18547, HG01492, NA18960, NA18618, NA19062, NA18574, NA18582, NA20768, NA18571, HG01365, NA19079, NA18949, NA20759, NA20518, NA20775, NA18990, NA18557, NA18985, NA20757, HG01550, NA20755, NA18539, NA20753, HG01124, NA18951, NA20535, NA20800, NA18538, NA19070, NA19056, NA20521, NA20760, NA19081, HG01498, NA20519, HG01149, NA18948, NA18534, NA18981, NA19064, NA18537, NA20525, NA18573, NA19084, NA18626, NA20581, NA18532, NA18553, HG01497, NA19059, NA19009, NA18555, NA18963, NA18570, NA18541, NA19012, NA18953, HG01148, NA20799, NA18632, NA18564, NA18628, NA19072, HG01551, NA20520, NA19010, HG01357, NA20790, NA20530, NA20527, HG01375, HG01113, NA20544, HG01137, NA19083, NA18943, NA18615, HG01342, NA18631, NA20510, NA18636, NA20786, NA20758, NA19080, NA20826, NA18983, NA20502, NA18989, HG01125, NA18623, NA19063, NA19065, NA20754, NA19074, HG01437, NA20772, NA18620, HG01356, NA20543, NA19055, HG01359, NA18980, NA18561, NA20531, NA18599, HG01389, HG01374, NA20532, NA18603, HG01465, NA18545, NA20805, NA19057, HG01456, NA18606, NA20507, NA18526, HG01140, NA20537, NA19068, HG01250, NA19076, NA20796, NA18944, HG01366, HG01488, NA18982, NA18635, NA20769, NA18942, HG01354, NA20540, NA19088, NA20513, NA18964, NA18611, HG01134, HG01455, NA20819, NA18977, HG01495, NA18560, NA19075, NA18617, NA18986, NA19087, HG01440, NA20811, NA20533, NA18973, NA18638, NA20818, NA19007, NA18614, HG01353, HG01136, NA18613, HG01360, NA19082, NA20524, HG01384, NA20505, NA19077, NA20809, NA18956, NA20536, NA18637, NA20506, NA20770, NA18630, NA19000, NA20538, HG01383, NA20828, NA18634, NA20534, NA18945, NA18576, NA20765, NA18546, NA20526, NA20773, NA20522, NA18542, NA20801, NA18961, NA18952, NA18941, NA20804, NA20785, HG01494, NA20516, NA20797, HG01491, NA19060, NA18987, NA20807, NA20528, HG01251, HG01377, HG01378, NA19004, NA18622, NA18562, NA18965, NA20509
Known GenesHLA-DQA1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2672916
Frequency
Sample Size1151
Observed Gain0
Observed Loss234
Observed Complex0
Frequencyn/a


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