A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2672915



Internal ID9939020
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:139963637..139963770hg38UCSC Ensembl
chrX:139045796..139045929hg19UCSC Ensembl
CytobandXq27.1
Allele length
AssemblyAllele length
hg38134
hg19134
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6191306, essv5857079, essv5825578, essv5773838, essv5975248, essv6534037, essv5432105, essv5529462, essv6346579, essv5805415, essv5446502, essv6564084, essv6401477, essv5414322, essv5904884, essv5853903, essv6437340, essv5827859, essv6384598, essv6209423, essv5588186, essv6437581, essv6280817, essv5440507, essv6476536, essv5947745, essv5710070, essv5440267, essv5535348, essv6594955, essv6080719, essv5799141, essv5748107, essv5649934, essv5595378, essv6247143, essv6203513, essv5802932, essv6553828, essv6139004, essv6389720, essv6363543, essv6035363, essv6125524, essv5897241, essv5976522, essv6341993, essv5551894, essv5984960, essv6458427, essv5669571, essv6547187, essv5762358, essv6420226, essv5471692, essv6275385, essv6146920, essv6141553, essv6591596, essv6026376, essv5710112, essv5542504, essv5508894, essv5564024, essv6419491, essv6420229, essv5582994, essv6106789, essv6456408, essv6223083, essv5670038, essv5753776, essv6177017, essv5965976, essv5786079, essv6260297, essv6070157, essv6509429, essv6515287, essv5794582, essv5659040, essv5743144, essv5843412, essv5464978, essv6073986, essv5406281, essv6447016, essv6123670, essv6370407, essv6550887, essv6369485, essv5574390, essv6591762, essv6042939, essv6032057, essv5582935, essv5546881, essv6090534, essv5457640, essv5752428, essv6213269, essv5569341, essv6460524, essv5877482, essv6485502, essv5543015, essv6248958, essv5425277, essv5410514, essv5587339, essv6163257, essv6059402, essv6222714, essv6397016, essv6291462, essv6150236, essv6232052, essv5452468, essv6166763, essv5599448, essv5658998, essv5780066, essv5590064, essv6264491, essv5981843, essv5727757, essv5724478, essv5863115, essv5947861, essv6243684, essv5797965, essv5647576, essv6039274, essv6199355, essv5414325, essv5839020, essv5783249, essv5602676, essv5479131, essv6428112, essv6494152, essv6273280, essv6323547, essv5767291, essv6196096, essv5450811, essv5508537, essv6585240, essv5744898, essv6312266, essv5928725, essv5433625, essv6428529
SamplesHG00189, NA19701, HG00592, HG01098, NA19703, NA19055, NA18924, HG01462, HG00608, NA18947, HG00671, HG00524, NA19399, NA18980, NA19704, HG01188, NA18999, NA19092, NA19684, NA18606, HG00179, NA18616, NA18633, NA18602, NA18988, HG00327, HG00663, NA19068, NA19005, NA18550, NA19319, HG00501, HG01177, HG00702, NA19723, NA18923, HG01492, HG00346, NA19771, HG01365, NA19681, NA18964, HG00537, NA19079, HG00590, NA19404, HG01069, HG00683, HG00148, NA20819, NA18977, NA20340, HG00534, NA18617, NA19385, NA19172, HG00422, HG00705, NA18985, NA20342, NA19985, NA19789, NA18539, NA19921, HG00739, NA12748, HG01124, NA20818, NA19007, NA10847, HG01183, NA18951, NA19247, NA18613, HG00629, HG01360, NA19707, NA19670, HG00596, NA19403, HG00557, NA18933, NA18956, HG00701, HG00657, NA18991, NA19663, HG00275, NA19658, NA18630, HG00692, HG00635, HG00740, HG01390, NA18573, NA20299, NA19084, HG00690, NA18499, NA18532, HG01101, HG00613, NA18553, NA19099, NA19009, NA18555, HG00276, HG00704, NA19682, NA19469, NA18945, HG01075, NA18576, NA18608, HG01148, NA19401, NA19003, NA12716, NA19390, NA18535, NA18559, NA18564, NA18628, NA18950, NA18941, HG00638, HG01174, HG01375, HG00473, NA19786, NA18943, HG01108, HG00662, HG00418, NA18615, HG00620, NA19398, HG00578, HG01491, NA19472, NA19779, NA19713, NA18636, NA19102, NA19900, HG00595, HG00472, NA18488, NA18624, NA18623, HG01191, HG01437, HG00581
Known GenesCXorf66
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2672915
Frequency
Sample Size1151
Observed Gain0
Observed Loss153
Observed Complex0
Frequencyn/a


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