A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2672266



Internal ID9591685
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:109680594..109702300hg38UCSC Ensembl
Outerchr1:109680173..109702870hg38UCSC Ensembl
Innerchr1:110223216..110244922hg19UCSC Ensembl
Outerchr1:110222795..110245492hg19UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg3822698
hg1922698
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv61e199
Supporting Variantsessv5478350, essv5487070, essv5558975, essv5903469, essv6578314, essv6193702, essv5531230, essv6033940, essv5941651, essv5754029, essv5470953, essv5816457, essv5680317, essv6288302, essv6424964, essv5408553, essv5560776, essv5566699, essv5496901, essv6065916, essv5897056, essv6371147, essv5447410, essv5645375, essv5923794, essv5872118, essv5541264, essv6242572, essv5853937, essv6365221, essv6208176, essv6121545, essv6024187, essv6486449, essv6193543, essv5996602, essv5954728, essv5570439, essv6291196, essv6227203, essv6163455, essv6396149, essv6404748, essv6372453, essv6245733, essv6255375, essv5595052, essv5523246, essv5556369, essv6109410, essv5659511, essv6382768, essv6266086, essv5409459, essv5521763, essv6141845, essv6048185, essv6554417, essv6540351, essv6228417, essv5849694, essv6258572, essv6096174, essv6310098, essv5958434, essv5835399, essv6552596, essv6147831, essv5496851, essv6405353, essv6061833, essv5652963, essv6204011, essv5652086, essv5686034, essv6417421, essv5597427, essv6404870, essv5929942, essv6561114, essv5866687, essv6576516, essv6320624, essv5921322, essv6367480, essv6043274, essv6109125, essv5959762, essv5634484, essv6279178, essv5606192, essv5467216, essv6518366, essv6567892, essv6468710, essv6463643, essv5632236, essv5737186, essv5634356, essv5850315, essv6456980, essv6170246, essv6091518, essv6156721, essv6180222, essv6429558, essv6559699, essv6396455, essv5812608, essv6522146, essv6073005, essv5820542, essv5756574, essv5687323, essv6083512, essv5681761, essv5401287, essv6347213, essv6514381, essv5572561, essv6331685, essv5728564, essv6572733, essv5845716, essv5402927, essv6555838, essv6211258, essv5674405, essv5423546, essv6495021, essv6099889, essv6119327, essv6535007, essv6250978, essv6078598, essv5919527, essv5830886, essv6532705, essv6099239, essv5573076, essv5471029, essv6542283, essv6261545, essv6236457, essv6496045, essv6076994, essv6082294, essv5627287, essv6114050, essv5972742, essv5866382, essv6192541, essv6499072, essv5462494, essv6006397, essv5819799, essv5491183, essv6167776, essv6218471, essv5774212, essv6585508, essv5620637, essv6472223, essv5515334, essv6290954, essv5677247, essv6367460, essv6112493, essv6055804, essv5844011, essv5887549, essv5770054, essv6520470, essv5980706, essv5724108, essv5585344, essv5666995, essv5592243, essv5571773, essv6572064, essv6019150, essv5399696, essv6541635, essv6271788, essv5542404, essv5515906, essv6184681, essv5404983, essv5427161, essv6330078, essv6330468, essv6306981, essv5911990, essv6584512, essv5526667, essv5637071, essv5526997, essv5795928, essv6283646, essv5898537, essv6088206, essv6276824, essv6120565, essv6039115, essv5934316, essv5975475, essv5733122, essv5954475, essv5727769, essv6331742, essv6121096, essv6458984, essv6530308, essv6482633, essv5534843, essv6283564, essv5844104, essv6351591, essv5624091, essv5649939, essv6518538, essv6502647, essv6476115, essv5869067, essv6051724, essv5562661, essv6277156, essv5640251, essv6346167, essv5847892, essv6316824, essv5541502, essv6588621, essv6243192, essv5523018, essv5799530, essv5674905, essv6593935, essv6561095, essv6046362, essv6315459, essv5820950, essv6297115, essv6058020, essv6568096, essv6071558, essv5977920, essv6206396, essv6145821, essv6090270, essv5982615, essv5885462, essv6351270, essv5992127, essv6350254, essv5975055, essv6447406, essv6038084, essv5577961, essv5983074, essv6023085, essv5442900, essv6296037, essv5673722, essv5411703, essv6465080, essv6347684, essv5974243, essv5696490, essv5469736, essv5408793, essv6574209, essv5513281, essv6520207, essv6531032, essv5604961, essv5666968, essv5844402, essv5770760, essv6439491, essv5999534, essv5903727, essv5993499, essv6372591, essv5546560, essv6543839, essv6327053, essv6370876, essv5792519, essv5673470, essv5682766, essv5810439, essv5815432, essv6253824, essv6035183, essv5476341, essv6123256, essv6446638, essv6256671, essv5985741, essv5725293, essv5903494, essv5877253, essv5788731, essv5567451, essv5424384, essv6542520, essv6099784, essv6101668, essv6140229, essv5728952, essv5860743, essv6571535, essv6227804, essv5595368, essv6010853, essv6489932, essv5656470, essv5441287, essv6274562, essv5799017, essv5545847, essv5407455, essv5510353, essv5959437, essv6511602, essv6035292, essv5782414, essv6427998, essv6058781, essv5907319, essv6438108, essv6220327, essv6088241, essv5526160, essv6492049, essv6074410, essv5549766, essv5749714, essv5496141, essv5942333, essv6016440, essv5790134, essv6322384, essv5936122, essv5860599, essv6376242, essv5982354, essv6536293, essv6324592, essv6202376, essv5502293, essv6533913, essv6073046, essv6197104, essv5935654, essv6390896, essv6316698, essv6193110, essv6380703, essv5754966, essv5575606, essv5426503, essv6261174, essv5854674, essv6034431, essv6028985, essv6009490, essv6378553, essv6552718, essv5588709, essv5643809, essv5616889, essv6592444, essv5824824, essv6220831, essv5801391, essv6264151, essv5955147, essv5725327, essv5614940, essv5716600, essv6399036, essv5977460, essv5507987, essv6310373, essv6306360, essv6493254, essv6331784, essv5703642, essv6096551, essv6282340, essv6502951, essv6096034, essv6569865, essv6192273, essv6141204, essv6152756, essv6267705, essv5509845, essv5845566, essv6581586, essv5962803, essv5853624, essv6577832, essv6027624, essv5672220, essv5595028, essv6365563, essv6265844, essv6033728, essv5410076, essv6580978, essv5887832, essv5861449, essv6320334, essv6410507, essv6355699, essv5883596, essv5565256, essv6400564, essv6286092, essv5802899, essv6549370, essv6236853, essv5771140, essv5751774, essv5653665, essv5859423, essv5552418, essv5538031, essv5932952, essv5612250
SamplesNA18511, NA18522, HG00180, NA18622, NA19153, NA18562, NA12776, NA18965, NA19394, NA12383, NA18502, HG00189, HG00650, HG00542, NA12717, HG00442, NA19058, NA12842, HG00608, NA18947, NA12286, HG00671, NA19204, NA18508, NA10851, HG00559, NA19399, NA12273, NA18565, NA12414, NA12843, NA11920, NA11931, HG00315, NA18999, HG00181, NA19359, NA19355, NA18504, NA12340, NA19377, NA18616, HG00449, HG00654, NA19443, NA18633, NA18510, NA12399, NA18602, HG00693, NA18988, NA18627, HG00337, HG00271, NA12813, NA19446, NA07346, NA19373, NA19171, NA19379, NA18940, HG00589, NA19319, NA18567, NA18558, NA18960, NA18618, NA19062, NA18574, NA07048, NA11918, NA07347, NA18582, NA19457, NA18571, HG00334, HG00185, NA19384, HG00537, HG00311, NA19079, NA18949, NA11930, HG00512, HG00281, NA12275, HG00335, NA12156, HG00325, NA12044, NA11994, HG00534, NA19207, HG00705, NA18990, NA18985, HG00323, NA12777, NA18951, NA18605, NA12489, HG00443, NA18538, HG00268, HG00266, HG00282, NA19070, NA19056, NA19403, HG00557, NA18933, HG00657, HG00368, HG00556, HG00583, HG00344, NA19081, HG00275, NA18579, NA12718, NA18572, NA18948, NA18534, NA18981, NA19064, NA18548, HG00324, HG00284, NA18573, NA19461, NA11919, HG00651, NA18626, HG00690, HG00404, HG00531, HG00479, NA12829, NA11893, HG00331, NA19453, NA18532, NA06989, NA19059, NA18555, NA19452, HG00704, NA12144, NA18523, HG00463, NA19469, NA12778, NA19395, NA18570, NA18593, NA19012, NA12043, NA18953, NA19375, NA19003, HG00611, NA19440, NA19390, HG00336, HG00625, NA19434, NA18564, HG00353, NA18628, NA19072, HG00580, NA12272, NA19331, NA19010, HG00473, NA19470, NA19428, NA19324, NA19083, NA18943, NA19360, NA12763, HG00662, HG00418, NA18615, NA18610, HG00620, HG00339, NA19328, HG00614, NA06994, HG00513, HG00478, NA18631, NA19223, HG00342, HG00267, NA19093, NA18636, NA18609, HG00310, NA19102, HG00280, NA11843, NA19116, NA19080, NA18983, HG00377, HG00274, HG00595, NA18989, NA19129, NA11892, NA19316, NA19312, HG00628, HG00171, NA18968, NA12006, NA19463, NA19063, NA12154, NA18612, NA19346, NA19074, HG00581, NA11832, NA18620, HG00593, HG00626, HG00403, NA11830, HG00592, NA19055, HG00536, NA19397, NA18924, NA11995, HG00361, NA18592, HG00524, HG00187, NA19332, NA18980, NA18561, NA18507, NA11933, NA18599, HG00306, NA18917, NA18603, NA12045, HG00318, NA18486, HG00699, NA12004, HG00566, NA12058, NA18606, HG00179, NA19190, NA18870, NA18526, NA12155, NA07357, NA12413, NA12341, HG00327, NA18967, NA19374, NA19068, NA19396, NA19076, NA18944, HG00501, NA19382, NA19448, NA18595, HG00702, HG00689, HG00448, NA19119, NA18982, HG00330, HG00634, NA19131, HG00610, NA11992, NA19197, HG00346, NA19088, NA12287, NA19054, HG00270, NA18964, HG00590, NA18611, NA19404, NA12761, NA12282, HG00277, NA19383, HG00683, NA06984, NA18977, NA19371, NA18560, NA18617, NA19385, HG00422, NA19471, NA19317, NA18986, NA19087, NA12889, HG00309, NA19002, HG00427, HG00338, NA12828, HG00178, NA18908, HG00530, HG00419, NA18638, NA12748, NA11993, HG00464, NA19007, NA18614, NA11831, HG00543, HG00313, HG00188, HG00560, NA19247, NA18613, HG00629, HG00176, NA19082, NA12342, NA19077, NA12003, HG00428, NA19462, NA19152, HG00190, HG00653, HG00577, NA18956, HG00701, NA19391, HG00475, NA19236, NA18516, HG00436, HG00320, HG00584, HG00533, NA18637, HG00500, NA18910, NA18976, NA18630, HG00619, HG00708, HG00635, HG00273, NA19000, NA19449, NA18499, NA12249, HG00613, HG00525, HG00321, NA18853, NA12827, NA19257, HG00276, NA19225, NA18536, NA18634, NA18945, NA18546, NA18608, NA19401, NA12716, NA18909, NA18535, NA11881, HG00285, NA19321, NA18961, NA18952, NA18543, NA18559, HG00565, HG00366, NA19473, NA18950, HG00375, HG00357, NA19435, NA18941, HG00278, NA19334, HG00607, HG00319, NA07037, NA19085, NA06986, HG00269, NA19376, NA19398, HG00707, HG00672, HG00578, NA19248, NA19438, NA19472, NA19060, HG00421, HG00329, HG00174, HG00698, NA19213, HG00343, NA18552, HG00372, NA07056, NA18505, NA19004, HG00345
Known GenesGSTM1, GSTM2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2672266
Frequency
Sample Size1151
Observed Gain0
Observed Loss433
Observed Complex0
Frequencyn/a


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