A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2671605



Internal ID9591024
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32553859..32580715hg38UCSC Ensembl
Outerchr6:32553818..32580776hg38UCSC Ensembl
Innerchr6:32521636..32548492hg19UCSC Ensembl
Outerchr6:32521595..32548553hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3826959
hg1926959
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1108e199
Supporting Variantsessv6540114, essv5463914, essv6547553, essv6385592, essv6014372, essv6129164, essv5657777, essv6034730, essv5647836, essv6095434, essv5861046, essv6538951, essv5448827, essv6172975, essv6480548, essv5732011, essv6596624, essv6288237, essv6034388, essv6205774, essv6015436, essv5667745, essv5600940, essv6401154, essv6043705, essv5738645, essv6377774, essv6160828, essv6590747, essv5649038, essv5882070, essv5725888, essv5539667, essv6432007, essv6232010, essv6378613, essv5644313, essv6295948, essv6194011, essv6346463, essv6466637, essv5982199, essv6228506, essv5641421, essv5624655, essv6133349, essv6353687, essv6045751, essv6511731, essv6537105, essv5827103, essv6039914, essv5981781, essv6213283, essv5844114, essv6592777, essv6489573, essv6562878, essv5775447, essv5436116, essv5750606, essv5452088, essv6364740, essv6420757, essv6441195, essv5617049, essv6591213, essv6235228, essv6151363, essv6079918, essv5776211, essv6543393, essv5969298, essv5411407, essv5542660, essv6361467, essv5552841, essv6175197, essv5457251, essv6541300, essv5993797, essv5745578, essv6461979, essv5752966
SamplesHG01356, HG00536, HG00608, NA20766, NA12286, NA19466, NA19066, NA18561, NA11920, HG01389, HG00367, NA19393, NA20332, NA20346, NA18602, HG01140, HG00663, NA19374, NA19068, NA19660, NA19381, NA19373, NA19728, HG00702, HG00689, NA19062, NA11918, HG01354, NA20291, HG00139, HG01519, HG00534, NA19172, NA19317, NA19087, HG00309, NA19002, NA18990, HG00323, NA19985, HG01353, NA12777, HG00154, NA20760, HG00708, HG00324, HG00250, NA12249, HG00613, HG00276, HG00152, NA19625, NA12546, HG01075, NA19401, NA19375, NA20801, HG00285, NA19147, NA12775, NA18628, NA19072, HG00278, NA07051, NA19470, NA19083, HG01108, HG00256, NA19783, NA06986, NA19759, NA19376, HG00614, HG00111, HG00267, NA19713, NA19474, HG00131, NA20826, NA19780, NA19316, NA19063, HG01061, NA20509
Known GenesHLA-DRB1, HLA-DRB6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2671605
Frequency
Sample Size1151
Observed Gain0
Observed Loss84
Observed Complex0
Frequencyn/a


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