Variant Details

Variant: esv2671552

Internal ID

9937657

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chrX:1293887..1294073	hg38	UCSC Ensembl
Outer	chrX:1293850..1294123	hg38	UCSC Ensembl
Inner	chrX:1412780..1412966	hg19	UCSC Ensembl
Outer	chrX:1412743..1413016	hg19	UCSC Ensembl

Cytoband

Xp22.33

Allele length

Assembly	Allele length
hg38	274
hg19	274

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6130534, essv6043303, essv6036730, essv6195994, essv6536864, essv5888547, essv6327861, essv6592408, essv5557871, essv5926863, essv5786225, essv5626536, essv5750322, essv5998890, essv6383561, essv5431394, essv5855441, essv6270869, essv6533015, essv6474484, essv6076570, essv5622370, essv5648266, essv6041985, essv5448747, essv6371852, essv5566220, essv6182020, essv6271744, essv5948938, essv6009159, essv6596935, essv6262805, essv6084021, essv5696045, essv6456443, essv5967690, essv6171091, essv6414292, essv5674382, essv5754957, essv6336051, essv6571272, essv5943211, essv5513657, essv6301348, essv6017843, essv5667313, essv6375370, essv6298253, essv5613595, essv6475939, essv6053300, essv5792872, essv6350872, essv5833723, essv5717137, essv5554569, essv5843422, essv6191811, essv6324612, essv5567266, essv6382812, essv6098277, essv6192684, essv6036788, essv6029542, essv5884273, essv6526226, essv5582874, essv5522108, essv5924391, essv5508906, essv5508427, essv6393146, essv6383804, essv5998857, essv6394437, essv6042135, essv5885020, essv5529122, essv5451509, essv6217589, essv5979426, essv5957502, essv5746666, essv6299646, essv6082122, essv6507376, essv5954113, essv5863966, essv5855974, essv5649802, essv5633276, essv5758713, essv6481081, essv5770735, essv6353497, essv6451367, essv6156447, essv5841295, essv5816367, essv6391369, essv6215520, essv6152452, essv6568318, essv5695513, essv6044303, essv6037022, essv6401334, essv6385534, essv6190850, essv5880920, essv6337174, essv6415567, essv5522966, essv5427090, essv5935170, essv5423430, essv6236952, essv5406972, essv6090990, essv5991971, essv6044720, essv5507049, essv5939972, essv6540507, essv6390220, essv6547846, essv5444166, essv6489668, essv5584763, essv5999299, essv6058699, essv6181521, essv5690667, essv6218693, essv6320720, essv5697553, essv5528652, essv5489182, essv5436181, essv6194399

Samples

HG01060, HG00542, HG00442, HG01356, NA19703, HG00536, HG00608, HG00524, NA18599, HG01374, NA18917, HG00699, NA18545, NA19819, NA18530, NA18606, HG00654, NA19190, NA19920, NA18633, NA18602, HG00337, HG00327, NA19374, HG00138, NA19373, HG00589, NA19382, NA18597, NA18489, HG01351, HG01488, HG00702, HG00689, HG00448, NA19198, HG01492, NA07347, HG00346, NA18582, HG00334, NA20287, HG00185, NA19384, NA18964, HG00537, HG00158, NA18611, NA19404, HG00277, HG01080, HG01067, NA19137, HG01072, NA20340, NA19371, HG00422, HG00705, HG01440, HG01048, HG00326, HG00530, HG00464, HG00108, NA19007, HG01183, HG00154, NA18613, HG00443, HG00282, HG00557, HG00328, HG00653, NA19391, HG00436, HG00584, HG00533, HG00500, NA18910, NA18871, HG01047, HG01102, HG00324, HG00284, HG00651, HG00250, NA12829, HG00331, HG01101, HG00613, HG00525, HG00140, NA12827, HG01334, NA19257, HG00276, HG00463, NA18536, NA19395, NA18593, NA19436, NA18546, NA19401, NA12716, NA19390, HG00285, NA18543, NA19712, HG00580, HG00278, HG01357, HG00237, NA19428, HG00319, NA07037, HG00418, NA18610, HG00620, HG00125, NA19376, NA19398, NA18501, HG00707, HG00111, HG00513, HG00329, HG00342, HG01055, NA19093, HG00123, HG00310, HG00186, HG00131, HG00343, HG00252, HG01377, NA19129, HG01082, NA12890, NA19463, HG01112, HG01437, HG00437

Known Genes

CSF2RA, MIR3690, MIR3690-2

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2671552

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	143
Observed Complex	0
Frequency	n/a