A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2671378



Internal ID9590797
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:149311642..149311808hg38UCSC Ensembl
chr6:149632778..149632944hg19UCSC Ensembl
Cytoband6q25.1
Allele length
AssemblyAllele length
hg38167
hg19167
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5786565, essv5444934, essv5728302, essv5571705, essv6076473, essv6081584, essv6132472, essv6046294, essv5448815, essv5604245, essv6400056, essv5420342, essv6102025, essv6013343, essv5401660, essv5965612, essv6516524, essv6233250, essv5792148, essv5934600, essv5820263, essv6432507, essv6267693, essv6534868, essv6056640, essv6281304, essv5737490, essv6111271, essv6082313, essv6113792, essv5439889, essv5455409, essv6038699, essv6313990, essv6020333, essv6054827, essv5739983, essv5982408, essv5408906, essv5649365, essv5990041, essv5935461, essv6392560, essv5731534, essv5872779, essv5899470, essv6449782, essv5980943, essv6133058, essv6211783, essv6309937, essv6427923, essv5778251, essv5567292, essv6014196, essv5927053, essv6104067, essv5618410, essv5831679, essv6338774, essv6063870, essv6282425, essv5687927, essv5995655, essv6388931, essv6451656, essv6007222, essv5399499, essv5928538, essv6255752, essv6455777, essv5834687, essv6462592, essv5759772, essv6542596, essv5683799, essv6479471, essv6569334, essv5548475, essv5825780, essv5887133, essv5909908, essv6528164, essv6238045, essv5445966, essv6357295, essv5613520, essv6251379, essv5707714, essv5957391, essv6141895, essv5817027, essv6077485, essv5676246, essv6295467, essv6366278, essv6089555, essv5441959, essv5888289, essv5931986, essv6409094, essv6132546, essv6021960, essv6246684, essv6507128, essv5658931, essv5518803, essv6567402, essv6329607, essv5993490, essv6475522, essv6399606, essv5849398, essv5756903, essv6489853, essv6156724, essv5487642, essv5730306, essv5954423, essv5999167, essv5462480, essv6361120, essv5538676, essv6075599, essv6127378, essv6473700, essv6587318, essv6566843, essv5622739, essv5460237, essv5510966, essv6426692, essv6499759, essv5538473, essv6386876, essv5711905, essv5770907, essv6001114, essv6166538, essv5821384, essv6087630, essv5761031, essv6487211, essv6056511, essv5858038, essv6102474, essv6114988, essv5560159, essv6197827, essv6126235, essv5747283, essv5906176, essv6527240, essv5718802, essv6346032, essv5477190, essv6160486, essv5977297, essv6200188, essv6229225, essv6218716, essv6553229, essv5504353, essv6515992, essv6525697, essv5496245, essv5505568, essv6396325, essv5876786, essv6502310, essv5711878, essv6004274, essv5629909, essv5891475, essv5916045, essv6226319, essv6432425, essv6229314, essv6492104, essv5512047, essv6016413, essv6386689, essv5674257, essv5892805, essv6063510, essv5880099, essv5715474, essv5947386, essv6140275, essv5764466, essv6590023, essv5521918, essv5671729, essv5575561, essv5817801, essv6276282, essv6378483, essv5847355, essv6113493, essv5497282, essv5632425, essv5580373, essv6001857, essv6133698, essv5711272, essv6089933, essv5938732, essv5671740, essv5614329, essv5464213, essv5816877, essv5780129, essv6210214, essv6164926, essv5812270, essv6273047, essv6310942, essv5978311, essv5654081, essv5532996, essv5730538, essv6241036, essv6469826, essv5764602, essv6109581, essv5429905, essv5639186, essv5675167, essv6289098, essv6519709, essv6464053, essv5839396, essv6400839, essv5982437, essv5816137, essv6049194, essv6171355, essv5474975, essv5671919, essv5745490, essv5858203, essv5751440, essv5401128, essv5549326, essv5805217, essv5932104, essv6016198, essv6381225, essv6495885, essv6079979, essv5986343, essv6563764, essv6345652, essv6217075, essv5582142, essv5865186, essv6165159, essv6063546, essv5563551, essv5612173, essv6204771, essv6109203, essv6083523, essv6109643, essv6082913, essv6140572, essv6305030, essv6432311, essv5906330, essv6210713, essv6049996, essv6072608, essv5901186, essv5990494, essv5569975, essv6277863, essv5728439, essv5960794, essv6154125, essv6214510, essv6371115, essv5736472, essv6384306, essv5771126, essv6499795, essv6525680, essv5743717, essv6215143, essv6492528, essv5899048, essv6039713, essv6519521, essv6256493, essv5586295, essv5469024, essv5962858, essv6346177, essv5477711, essv5915668, essv6329590, essv6557037, essv5813490, essv6478740, essv5698153, essv5575068, essv5486873, essv6453453, essv6493236, essv5406831, essv6086257, essv6379364, essv5819350, essv5828547, essv5909462, essv6094011, essv6070338, essv6273499, essv6500214, essv5499060, essv6151171, essv6181584, essv5586504, essv5485122, essv5772568, essv6563956, essv6512016, essv5972931, essv6345379, essv6372605, essv6561920, essv6011864, essv6188054, essv6005949, essv6146689, essv5646944, essv5723896, essv6205653, essv6030649, essv6186445, essv5420790, essv5543837, essv5540403, essv6218943, essv6585110, essv5755345, essv5807360, essv5659764, essv5924851, essv6257655, essv6552169, essv5854121, essv5489478, essv6189058, essv6540023, essv6303574, essv6568666, essv6269630, essv6447466, essv5866759, essv5801709, essv6537049, essv5604824, essv6504579, essv5490116, essv5895020, essv6087414, essv6097387, essv5456507, essv6331032, essv6212298, essv5668682, essv5597697, essv6500310, essv5456220, essv5968788, essv5858578, essv6448664, essv6534751, essv5980537, essv6244103, essv5480183, essv5855204, essv5787447, essv5808275, essv6273992, essv6560151, essv5533489, essv6094574, essv6225726, essv5926590, essv5928502, essv6296349, essv6227596, essv5524569, essv5400271, essv6388821, essv6349186, essv5486670, essv5777619, essv6425396, essv6501054, essv5782203, essv5738638, essv6275619, essv6466158, essv5459316, essv5898911, essv6077609, essv5742552, essv6260828, essv6427337, essv5507014, essv5602608, essv5643464, essv6249551, essv6520630, essv5730590, essv6163683, essv5629878, essv5705143, essv5464099, essv5775670, essv6047971, essv5553755, essv6195517, essv6000350, essv5718192, essv6199644, essv5958535, essv5610523, essv6118775, essv5532320, essv6369419, essv5795063, essv5789909, essv6361578, essv5625782, essv6481026, essv6341305, essv5441810, essv5797078, essv6316323, essv6355662, essv6219555, essv5425189, essv6545175, essv5418635, essv5781159, essv6021524, essv6575391, essv5725807, essv5781646, essv5412210, essv6563578, essv5718070, essv6233812, essv6537856, essv5818675, essv5479812, essv5604400, essv5904071, essv5423955, essv6519500, essv6014280, essv6021675, essv5773327, essv5528435, essv6560252, essv6270482, essv5941138, essv5536146, essv6223997, essv5474843, essv6440408, essv6235424, essv6026095, essv6443512, essv6178040, essv5571796, essv5680884, essv5800388, essv6172043, essv5799302, essv6559211, essv6235611, essv5560932, essv5625805, essv6152605, essv6298213, essv5707977, essv5788542, essv5556952, essv5689156, essv6174851, essv5535285, essv5719530, essv5798160, essv6088960, essv5557492, essv5564529, essv5709911, essv5876453, essv5893422, essv6203276, essv6415841, essv5598884, essv6067808, essv6156849, essv5513563, essv6518584, essv5756244
SamplesHG01357, HG01441, NA11881, NA18870, NA12154, HG00537, HG00252, NA18605, HG01440, NA07347, HG00257, NA18520, NA18595, NA18951, NA20527, NA18534, HG01353, NA18530, NA18535, NA18630, NA18871, HG00418, NA19081, NA19819, NA12342, HG00328, NA19437, NA20752, HG00437, HG00500, NA11920, HG00171, HG00112, HG00274, NA12347, NA18501, NA19093, HG00131, NA20796, HG00565, NA18526, NA20535, NA20531, HG00160, NA11918, NA20346, NA10847, NA18603, NA20296, NA20759, HG01197, HG00657, NA19359, HG00614, HG01051, HG01365, HG00189, NA19788, HG01082, NA18953, HG01488, NA18517, HG00428, HG00475, HG00542, HG00148, NA19920, HG01350, HG00739, NA18546, NA12058, NA18507, NA20539, HG00111, HG00334, NA19685, HG00187, NA07051, NA19651, HG00335, HG01101, HG01134, HG01168, NA19682, NA19701, HG00319, HG00737, HG00253, HG00699, NA18557, NA18943, NA19761, HG01171, HG00353, NA18628, NA18868, NA20340, NA19062, HG01550, NA19463, HG00158, HG00556, HG01148, NA20505, NA11919, NA19085, HG00346, HG01384, NA19239, NA18627, NA19076, HG01375, HG00421, NA12004, HG00308, HG01378, NA19917, NA20811, HG00096, NA18623, HG01048, HG01061, NA18617, HG00692, NA18636, HG01124, NA18592, NA19083, NA19088, HG00315, NA12761, NA18956, NA19429, HG00338, NA18609, HG00125, HG01360, NA11843, NA11831, NA11894, NA18637, HG01253, NA11995, NA18916, HG00634, NA18593, HG00284, NA19457, HG00343, NA12144, NA20341, HG00662, NA12751, NA19000, NA19055, NA20769, NA19725, HG00267, NA19380, NA19395, NA19786, NA12716, NA19771, HG00233, NA19372, HG00653, HG00640, NA20348, HG00732, NA19384, HG00185, NA20795, NA19102, HG00263, NA20753, NA12275, NA19005, NA18510, HG00176, NA19002, NA19664, HG00265, HG00672, HG01170, HG01069, NA11892, HG00277, HG00103, NA20815, HG00740, HG00534, NA20766, HG00525, NA19328, NA18910, HG01383, NA20813, NA19789, HG00236, NA19777, NA12891, NA12890, NA20525, HG00427, HG01137, NA18597, NA19921, NA19138, NA19391, NA19723, NA20276, NA18538, NA20518, NA19116, NA19431, NA20289, NA19747, NA20287, HG00118, NA18544, HG00654, HG01390, NA12878, NA18614, NA18548, NA11830, NA20810, HG00285, NA12546, HG01366, NA19198, HG01108, NA20758, NA11932, HG00566, NA11829, NA19130, HG00320, HG01498, HG00275, HG00625, HG00690, NA12717, HG00641, HG00473, HG01377, HG00671, NA19087, HG00702, HG00271, NA19466, HG00531, NA18553, HG00312, HG00327, HG00323, NA12827, NA18964, NA19445, HG00152, HG00734, HG01518, NA12249, NA18861, NA19436, HG00318, NA12750, NA20514, NA11930, NA19321, NA20522, NA20809, HG00344, HG01072, NA20785, HG01052, HG00100, HG01075, NA18561, NA20506, NA18933, NA19404, HG00127, HG01055, NA18952, NA18612, HG00731, HG00245, NA19401, NA20508, HG00449, NA19060, HG00310, NA18550, NA19072, HG00707, NA18511, NA19455, NA20299, NA20802, NA20775, NA18948, NA19670, NA11931, HG00117, NA20808, HG01492, NA19451, NA20816, HG00173, HG00326, HG01491, NA20778, NA18542, NA19782, HG00553, NA19834, HG01204, HG00651, HG00557, HG00146, NA18488, NA19474, NA19084, NA19780, NA12341, NA12044, HG01551, NA18873, NA19147, HG00188, NA18626, NA19776, NA19654, NA20586, HG00247, HG01521, HG00256, NA18632, NA20770, HG00342, NA19762, HG00543, HG00321, HG00339, NA19726, NA19914, NA19428, NA20585, NA19383, NA20533, NA18934, HG00250, NA18508, NA19059, NA20819, NA12282, NA20356, NA20515, NA19652, HG00583, NA12383, HG00337, NA11994, NA19660, HG00140, HG00638, HG00180, NA18563, NA07357, NA19900, HG00610, HG00231, HG01495, HG01047, NA18856, HG00628, HG00330, NA18638, NA19398, NA19440, NA20541, HG00150, HG00419, NA12829, HG01113, HG01136, NA19835, NA20282, NA19773, NA18982, NA19681, NA19663, HG00403, HG00357, HG00584, NA19316, NA19684, NA20773, HG00114, HG01497, NA19213, NA19676, HG00436, HG00159, NA12046, HG00108, NA18620, NA12892, NA18572, NA19703, NA20536, HG00268, HG01066, NA20126, NA19373, HG00629, NA18923, NA20826, NA06986, NA18502, NA19657, NA19731, HG01073, HG00239, NA18941, HG00273, HG00282, HG00232, HG01356, HG00478, NA20774, NA20828, NA18613, HG00513, NA20582, HG00153, HG01070, HG00246, NA18562, NA19074, HG01060, NA19382, HG00589, NA18945, HG01149, NA18606, NA10851, NA20537, HG00443, NA18599, NA18907, HG00181, HG01334, NA12749, NA20332, HG00650, NA19394, NA18565, HG00138, HG00663, NA12156, HG00262, NA18560, HG00580, NA18602, NA18577, NA19099, NA20509, NA20507, NA18533, NA11992, NA19064, NA19770, HG00281, NA19327, NA11993, NA12399, NA19399, NA19655, NA19070, HG00367, HG00251, HG00324, NA20528, NA18532, NA18549, NA18853, HG01374, HG00137, HG01102, HG01462, NA19079, NA19381, HG00143, HG00336, NA19448, NA20502, NA20517, HG00272, NA19092, NA19007, NA20519, NA18519, NA19065, NA07000, NA12775, NA18980, HG01067, HG00361, HG01198
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2671378
Frequency
Sample Size1151
Observed Gain0
Observed Loss511
Observed Complex0
Frequencyn/a


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