A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2670341



Internal ID9589760
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:109667920..109668235hg38UCSC Ensembl
chr9:112430200..112430515hg19UCSC Ensembl
Cytoband9q31.3
Allele length
AssemblyAllele length
hg38316
hg19316
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5556722, essv5924052, essv5454006, essv6166190, essv5589930, essv6068772, essv5586960, essv6106778, essv6419305, essv5716003, essv5682255, essv5629422, essv6408370, essv5526706, essv5954974, essv6510816, essv5726445, essv5767414, essv5851884, essv5517800, essv6293722, essv6033068, essv6575511, essv6536473, essv6297171, essv6195293, essv6581842, essv6262117, essv6424633, essv5452384, essv6323620, essv5888191, essv6102303, essv5815756, essv5511921, essv6098113, essv5761381, essv5854509, essv5452415, essv6530750, essv6470937, essv5807431, essv6374519, essv5416149, essv6059213, essv5770631, essv6386990, essv5432522, essv6381617, essv6190797, essv6306799, essv6506654, essv6033698, essv5869038, essv5462503, essv6335329, essv6164745, essv5471959, essv6081378, essv5940396, essv5609801, essv6074494, essv6051019, essv5690629, essv6196067, essv6589157, essv5693321, essv5580508, essv5529044, essv5446332, essv5570960, essv5905439, essv6490627, essv6432764, essv6213675, essv5522475, essv5577812, essv6531926, essv6416504, essv5632146, essv5897331, essv6234286, essv5778388, essv5966551, essv6084190, essv6002063, essv6388778, essv5417913, essv5775013, essv5636502, essv6354351, essv6040911, essv6123761, essv5790740, essv6546336, essv6572103, essv6314147, essv6473593, essv6251924, essv5674850, essv6285147, essv6121171, essv5618186, essv6452401, essv5659153, essv5854929, essv5884140, essv6265665, essv6500527, essv6040671, essv5821971, essv6260491, essv6093115, essv6360085, essv6325415, essv5764515, essv5700160, essv6592553, essv5590802, essv6491750, essv6259384, essv5645523, essv5540910, essv6561804, essv6100006, essv5610140, essv6019003, essv5492162, essv6029249, essv5900557, essv5688568, essv6553065, essv6279626, essv5718938, essv6556620, essv6102531, essv5405883, essv5917345, essv6080209, essv5738997, essv6386785, essv6185788, essv6358124, essv6069524, essv5948783, essv5752848, essv6595917, essv6203810, essv6333323, essv6529276, essv5634660, essv5687478, essv6416321, essv6127254, essv5409503, essv5556760, essv6197761, essv5715165, essv6553181, essv6311358, essv5397957, essv6571783, essv5614293, essv5418583, essv6260210, essv6242849, essv6033542, essv5915228, essv5728477, essv5850656, essv6232481, essv6006612, essv5735432, essv6180987, essv6194173, essv5422028, essv6212984, essv5433682, essv6143065, essv5899825, essv5730591, essv6592795, essv6531770, essv6022122, essv6435707, essv6197145, essv5687683, essv5789214, essv5982352, essv6592567, essv6273603, essv5964875, essv6587282, essv5932518, essv5524740, essv5471849, essv5951753, essv5695045, essv5451206, essv5535387, essv6295818, essv6341639, essv6301455, essv5617386, essv6502744, essv5983031, essv6448670, essv5758276, essv5630635, essv6575673, essv5637810, essv6143119, essv5691158, essv5731513, essv5740512, essv5456081, essv5444535, essv5885707, essv6574367, essv5556003, essv6004358, essv5756144, essv5902063, essv6408904, essv6193315, essv5867046, essv5621341, essv5657593, essv6096916, essv6473804, essv6349676, essv6427904, essv6510057, essv5700910, essv5725205, essv6598404, essv5971659, essv6266097, essv6180088, essv5565965, essv5547811, essv5937917, essv5417608, essv5981560, essv5793974, essv6146104, essv6278623, essv5853185, essv5455826, essv6257472, essv6146005, essv5746854, essv5638206, essv5589151, essv6313902, essv6057815, essv5832921, essv6162389, essv6017245, essv5435360, essv5668006, essv5977207, essv6142910, essv5409946, essv6289920, essv6160499, essv6562701, essv6324263, essv5834086, essv5886027, essv6313576, essv5985501, essv5621729, essv5817172, essv5886146, essv5559037, essv6488142, essv5504903, essv5932172, essv5554864, essv5487322, essv6440286, essv5548967, essv6271565, essv5696495, essv5565148, essv5886015, essv6453440, essv5487080, essv5915149, essv5512442, essv5714145, essv6459276, essv6295257, essv6515301, essv6132497, essv5970941, essv6337177, essv6021018, essv5400899, essv6116097, essv6093179, essv5467930, essv6497210, essv6025001, essv6023632, essv5583569, essv5800272, essv6258433, essv5618966, essv6124946, essv6325991, essv6084917, essv6313260, essv5989799, essv6064570, essv6377702, essv5839247, essv6546380, essv5496299, essv6306131, essv5751677, essv6536217, essv6242049, essv6370922, essv5911924, essv5947872, essv5829601, essv5846757, essv5654655, essv6462674, essv5919024, essv6362136, essv5949012, essv6170402, essv5423964, essv5704724, essv6388760, essv5753937, essv6459426, essv6072193, essv6170702, essv6130957, essv6275997, essv6244228, essv6109446, essv6296950, essv6275760, essv5633594, essv6252793, essv6554867, essv6085512, essv5398701, essv6361682, essv5930810, essv5639777, essv6304308, essv5521959, essv6465820, essv5861600, essv5676510, essv5629973, essv6217919, essv6379219, essv6559622, essv6307039, essv5945091, essv5915115, essv6531126, essv5736293, essv5596765, essv6061656, essv6050683, essv6307913, essv6459031, essv6176807, essv5758313, essv6411441, essv5710204, essv5701565, essv6508026, essv6590724, essv6048886, essv5427946, essv5749298, essv6468860, essv6360326, essv5995186, essv5923323, essv5934184, essv5727546, essv5774418, essv6405162, essv5744630, essv5559019, essv6090310, essv5600114, essv6202295, essv5708812, essv5583625, essv5889558, essv6499085, essv6329481, essv6241569, essv6091725, essv6040260, essv5891254, essv5593844, essv5920354, essv6459112, essv6460431, essv5680141, essv6381180, essv5468789, essv6520920, essv6112765, essv5950840, essv6383529, essv6526079, essv6356922, essv5710556, essv5572470, essv6143812, essv5433173, essv5874569, essv6017154, essv6183313, essv5470456, essv6283748, essv6276821, essv6037004, essv5505577, essv6500665, essv6416419, essv5669808, essv6448043, essv6327600, essv6231582, essv5721656, essv6186602, essv6223701, essv5693145, essv6075899, essv6257881, essv5663277, essv5585671, essv6276713, essv5752804, essv5511554, essv6498102, essv6126556, essv6040446, essv6136251, essv5504349, essv6423035, essv6365613, essv6272883, essv6235439, essv6120804, essv6291586, essv6518456, essv6127076, essv5925726, essv6006443, essv6366433, essv6588636, essv5617212, essv6162231, essv5845877, essv5728088, essv6344252, essv6278277, essv6070039, essv5931296, essv5963100, essv5518666, essv5646906, essv5552480, essv6596727, essv6337384, essv6579347, essv6305400, essv6103146, essv5831127, essv5874160, essv6520969, essv5462144, essv6097850, essv6470774, essv5995001, essv5637062, essv6210987, essv5497530, essv5989846, essv6059052, essv6050453, essv5963174, essv5724783, essv5475401, essv5751540, essv5480110, essv6361167, essv6256913, essv5821999, essv6463898, essv6156930, essv6173825, essv6423971, essv5404233, essv5944591, essv5866255, essv6306807, essv5864660, essv5523730, essv5848238, essv5695726, essv5402195, essv5735149, essv6093633, essv5962672, essv5897318, essv6438554, essv5777092, essv5441783, essv5517083, essv5419792, essv6334494, essv6365016, essv6083688, essv6008210, essv5799098, essv6305494, essv6263311, essv5859078, essv5762978, essv5514728, essv5503674, essv5994281, essv5588851, essv6048625, essv5931700, essv6111793, essv6022384, essv6198320, essv6331353, essv6213597, essv5530863, essv6403796, essv5402558, essv5910974, essv6330019, essv6229822, essv6294482, essv5976083, essv6167413, essv5760998, essv5491771, essv6132241, essv5981857, essv5600990, essv5755322, essv5511005, essv6446278, essv6409863, essv5807949, essv6479231, essv6286566, essv5570730, essv6354958, essv5426125, essv6359961, essv6349957, essv6490623, essv6397306, essv6230786, essv6374531, essv6202526, essv5965808, essv6114960, essv5675261, essv6423711, essv5514248, essv5992114, essv6405568, essv6131398, essv6225011, essv6446471, essv5799857, essv5535161, essv6513898, essv5819704, essv5669892, essv6533551, essv6033894, essv6435465, essv6020055, essv5968696, essv5959458, essv6370058, essv6546959, essv6434864, essv6100257, essv6179851, essv5950762, essv5862888, essv6404567, essv6371209, essv6446171, essv6136767, essv5892210, essv6208447, essv6294941, essv6242420, essv5423484, essv6290248, essv5717315, essv5629644, essv5427811, essv5788510, essv6553139, essv5718528, essv5773139, essv6410714, essv6365070, essv6457521, essv6391134, essv6062735, essv5616722, essv5708368, essv5979216, essv5411677, essv6021456, essv5866897, essv6354409, essv6196702, essv6160769, essv5556821, essv5612491, essv6430100, essv5724675, essv6394056, essv5507774, essv5420821, essv6162372, essv6289683, essv5433228, essv6578935, essv6545208, essv5875235, essv6576509, essv5783963, essv6116015, essv6035013, essv6205120, essv6336168, essv6406646, essv6296135, essv6183876, essv5899293, essv6071971, essv5541449, essv5840512, essv5834603, essv6409952, essv5518180, essv5817457, essv5822340, essv6266890, essv5567790
SamplesNA20588, NA18502, HG00442, HG00608, NA18621, HG00142, NA18947, NA19399, NA12843, NA11931, HG00257, HG00151, NA20512, NA12751, HG00153, NA18504, NA19377, NA18530, NA19920, NA18633, NA12750, NA19067, HG00337, NA19446, HG00138, HG01350, NA19379, HG00589, NA19315, NA20798, HG01177, HG01167, NA20756, NA20795, NA18547, HG01492, NA18960, NA18916, NA18574, NA11918, NA18582, NA20768, HG01083, HG01365, NA19384, HG00311, HG00512, HG00281, NA19720, HG00335, NA20775, NA18868, NA19238, NA19172, NA19239, NA18985, HG00326, NA20757, HG00323, NA19985, NA18867, NA20515, NA20755, NA19921, NA18951, NA18605, NA20535, NA12489, HG00731, NA20800, HG00266, NA19070, NA19056, HG01095, NA20810, NA18572, NA18948, HG00692, NA19064, NA18548, NA18907, HG01047, HG00690, HG00404, NA12829, NA11893, HG00331, NA19453, NA18532, NA06989, HG01334, NA19009, NA19452, NA18523, HG00463, NA19318, NA12778, HG00126, NA18593, HG01107, NA20799, NA19652, NA19440, HG00336, NA18517, NA19712, NA19434, NA18564, NA19331, NA20520, HG01174, NA19470, NA19428, NA19083, NA18943, NA20281, NA19360, NA12763, NA18615, HG01342, NA12347, NA19328, HG00614, HG00478, NA18631, NA19779, HG00267, NA18609, NA19102, NA18873, NA19770, HG00377, HG00274, NA20503, HG00595, NA19129, HG00628, NA19065, NA18612, NA19429, NA19074, NA18487, HG01437, NA18577, HG00593, HG00096, HG00114, NA19648, NA19700, HG00592, NA19055, NA19397, NA18924, NA19466, NA11995, NA18592, HG01359, HG01052, NA18980, HG01079, NA19704, NA18507, HG01188, NA11933, NA18599, HG01389, HG01374, NA20813, NA18603, NA12045, NA19819, NA12004, NA12058, NA20808, HG00150, NA20507, NA19190, NA18526, NA12400, NA12341, NA19068, HG01250, NA19076, HG00251, NA18489, NA18595, HG00689, HG00173, NA19723, NA18635, HG00330, NA20769, HG00634, NA18942, HG00736, HG00610, HG01354, NA20540, NA19313, NA12287, NA18498, NA20513, NA20336, NA12282, HG00277, HG00120, HG00683, HG01170, NA19719, NA18560, NA19471, NA19087, NA12889, HG00182, NA19002, NA19725, NA19189, NA18520, HG00338, HG00178, NA18908, NA18973, HG00530, HG00419, NA19451, NA18638, NA12748, HG00464, NA19007, HG00543, HG01136, HG00188, HG00149, HG01360, HG00183, NA19082, NA20524, HG01384, NA12342, NA19077, HG00428, NA19462, NA19347, NA19391, NA18991, HG00475, HG00584, NA19788, NA18910, NA20770, NA19776, NA19000, NA19655, HG01197, NA18499, NA12892, NA18853, NA20282, NA19225, NA20828, NA19756, HG00141, NA18536, NA18576, NA20296, NA19685, NA19401, HG00476, NA20801, NA18535, NA11881, NA19108, NA18952, NA18543, NA12775, NA18950, HG01253, HG00136, HG00638, NA07051, HG00607, NA19786, HG00319, HG01108, HG00256, HG00125, NA20341, NA19818, NA19376, HG00707, HG00578, HG00312, NA19438, NA20582, HG00329, HG00174, NA12830, NA19726, HG00343, NA18552, HG00372, HG00252, HG01377, HG00472, NA18505, NA19004, NA20322, HG00345, NA18549, HG00437, NA19394, NA20761, HG00542, NA12717, NA12842, NA19703, NA19909, HG00671, HG00242, NA18861, NA18508, NA10851, HG00559, NA12273, NA20783, HG01066, HG00315, NA20816, HG00244, NA19350, NA19359, NA19355, NA12340, NA18959, HG00737, HG00449, HG00654, NA19443, NA20356, HG00261, NA20771, NA18510, NA12399, HG00693, NA18988, NA18627, HG00271, NA07346, NA18563, NA19373, NA18519, HG00272, NA19319, NA18597, HG01351, HG01168, NA18923, NA18567, HG00238, NA19062, NA07347, NA19457, HG00334, NA20287, HG00185, NA19904, NA19130, NA20539, HG01069, HG01080, NA20518, HG00148, HG00325, NA11932, HG00232, NA19372, NA12044, NA11994, NA19235, HG00705, NA19722, HG00160, HG00118, NA18557, HG01048, HG01133, NA20342, NA20127, HG00253, NA18539, NA20753, HG01124, HG00154, NA19908, HG00268, HG01171, HG00282, NA19670, NA19403, HG00245, HG00732, NA19455, HG00556, HG00583, HG00263, HG00275, NA18579, NA18871, HG01149, NA18534, HG00740, NA20525, HG00284, NA19461, NA11919, HG00651, HG00250, NA18626, NA20581, HG00684, NA18912, HG01101, HG00140, HG01497, NA19099, NA18555, HG00152, HG00704, NA12144, NA19469, HG00246, NA18570, NA18858, NA12546, NA18541, HG01075, NA19012, NA18953, NA19375, NA19003, HG00258, HG00254, NA19390, HG00265, NA19147, NA19747, HG00353, NA19072, NA12272, HG01551, HG00734, HG01357, NA20790, NA20530, NA20527, HG01375, HG00473, NA20778, HG00237, NA19679, NA19324, NA19311, HG00418, NA18610, HG00339, NA18501, HG00259, HG00342, NA19716, NA19468, NA19093, NA20510, NA18636, NA20289, HG00310, HG00280, NA11843, NA19116, NA19080, NA19711, NA19900, NA18983, NA20502, NA19430, HG01111, NA19312, HG01125, HG00171, NA12890, NA12006, NA19463, NA18623, NA20585, NA20754, NA19346, NA18620, HG00403, HG01521, HG01098, HG01356, NA20543, HG00536, HG00231, NA11829, HG00361, HG00524, NA19914, NA19332, NA20531, NA20532, NA18917, HG00640, HG00367, HG00318, NA18486, HG00103, NA18545, NA19393, NA20805, NA18596, HG01456, HG00566, NA18606, HG00177, NA18870, NA12155, NA07357, HG01140, HG00327, NA19374, NA19396, NA19381, NA20796, NA19005, NA18944, HG01366, HG01070, NA19382, NA19448, HG01488, NA20586, NA18982, NA19198, NA18619, NA12891, NA12348, NA11992, HG00346, NA12283, NA19771, NA19088, NA19138, HG00369, NA19782, NA18964, HG01067, NA19383, NA18874, NA06984, NA18977, HG01495, NA19917, NA19137, HG01072, NA19385, HG00422, HG01440, HG00309, HG00427, NA19901, HG00159, NA19456, NA19445, NA11993, HG00260, NA11831, NA10847, HG01353, HG00133, HG01183, NA18544, NA19437, HG01187, NA18934, HG00596, HG00145, HG00328, NA12003, HG00653, HG00577, NA18956, NA19236, NA18516, HG00436, HG00320, NA18637, HG00708, HG01390, NA18566, HG01073, NA19114, NA20299, NA19449, NA18856, NA12249, HG00117, HG00613, HG00321, NA19257, HG00276, NA20534, NA18945, HG01204, NA19436, NA18546, HG00124, NA20773, NA20522, NA18542, NA18909, HG01190, HG00285, NA19321, NA18961, HG00357, NA19435, NA18941, NA20804, NA19240, HG00278, NA19380, NA20785, NA12046, NA19334, NA19439, NA19467, NA20516, NA20797, NA07037, NA19085, NA06986, NA19398, HG00111, NA20348, HG01491, NA19060, HG00421, NA20334, HG01254, HG01055, HG00186, HG00698, HG00131, NA19213, NA20528, HG01251, NA19661, HG01378, NA18488, HG01082, NA18511, NA07000, NA18522, HG01112, HG00180, NA18622, NA18562, NA12776, NA18965
Known GenesPALM2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2670341
Frequency
Sample Size1151
Observed Gain0
Observed Loss669
Observed Complex0
Frequencyn/a


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