A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2669960



Internal ID9936065
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:39824198..39839004hg38UCSC Ensembl
Outerchr9:39823727..39839474hg38UCSC Ensembl
Innerchr9:41969216..41984022hg19UCSC Ensembl
Outerchr9:41968745..41984492hg19UCSC Ensembl
Cytoband9p12
Allele length
AssemblyAllele length
hg3815748
hg1915748
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1338e199
Supporting Variantsessv6355023, essv6578778, essv5507581, essv6029589, essv6049929, essv6242437, essv6518721, essv5554190, essv6137433, essv6034503, essv6299474, essv5618506, essv6001916, essv6552890, essv5432555, essv6125886, essv6495864, essv6358494, essv6271112, essv6160887, essv6531632, essv5478079, essv5601884, essv5680455, essv5450559, essv6429499, essv6142070, essv5945737, essv6185056, essv6400992, essv5698495, essv6138122, essv5641276, essv5712857, essv5652986, essv5650189, essv5867047, essv6101987, essv5845405, essv5459331, essv5518967, essv5554755, essv5453842, essv6112415, essv5440401, essv5428422, essv5799468, essv6160182, essv5457649, essv6406206, essv5821510, essv6202736, essv6491335, essv5603977, essv6409537, essv6364813, essv5529292, essv6099434, essv6301848, essv6331320, essv5710285, essv5835634, essv5416969, essv6594789, essv6067818, essv6396530, essv6015617, essv6328540, essv5587993, essv5396853, essv5657785, essv6575198, essv5795422, essv6531415, essv6593789, essv5830848, essv6287485, essv6386469, essv6359887, essv5477449, essv5873074, essv6557377, essv6175150, essv6493481, essv5477222, essv6251348, essv6595644, essv5925021, essv6463791, essv6544954, essv5728370, essv6058763, essv6515598, essv6524040, essv6240063, essv6497770, essv6496189, essv5532086, essv5442028, essv5942458, essv6536338, essv5791454, essv6162279, essv5979540, essv5696125, essv5718505, essv6327503, essv6208357, essv5618866, essv6076092, essv6532216, essv5595032, essv5735128, essv6157641, essv6023217, essv5503894, essv5545154, essv5796796, essv6385520, essv5463074, essv6455033, essv5996654, essv6381301, essv6544236, essv5656051, essv5864570, essv6293845, essv6434242, essv5463305, essv5889703, essv6276277, essv5837786, essv5512154, essv5985175, essv5970814, essv5461914, essv5405765, essv5555935, essv6200826, essv5918505, essv5803254, essv5959236, essv6162381, essv6586304, essv6265328, essv6478858, essv5598351, essv6041709, essv6472411, essv5668750, essv5972031, essv6320808, essv5522759, essv6018676, essv5494990, essv5583034, essv5827551, essv6032270, essv6591887, essv6183980, essv6453343, essv5415382, essv5742585, essv5442249, essv6107782, essv6144413, essv5973693, essv5604840, essv5971983, essv5493820, essv5988522, essv6045135, essv6539040, essv5487099, essv6168925, essv6571911, essv5424778, essv5720013, essv6004321, essv6090641, essv6098719, essv5643430, essv6358311, essv5810335, essv6133876, essv6056068, essv5961808, essv5838020, essv6441292, essv6481602, essv6458323, essv5734020, essv6326863, essv5871702, essv6522319, essv5649387, essv6256243, essv5750128, essv6040928, essv6129764, essv6391690, essv6137384, essv5515732, essv5745814, essv6274326, essv6555018, essv5546535, essv6567427
SamplesNA20585, HG01097, NA20509, HG01516, NA20588, HG01060, HG00189, HG00114, NA19701, NA20761, NA20529, HG01098, HG00143, NA20543, NA19909, HG00142, NA20766, HG00361, HG00242, NA19914, HG01052, HG00187, NA20783, HG00100, HG01188, HG00257, HG00315, HG00306, NA20816, NA20813, NA20752, HG00233, NA20802, NA20512, HG00640, HG00367, HG00318, HG00244, HG00181, HG00103, NA19819, NA20805, HG00737, HG00179, NA20346, HG01518, HG00177, HG00150, NA20356, NA19920, NA20771, NA20806, HG01522, HG00337, HG00138, NA20796, HG01070, HG00272, NA20798, NA20589, HG01167, NA20586, HG00173, HG01168, NA20756, HG00330, NA20769, HG00346, HG01083, HG00247, HG00369, HG00270, HG00334, HG00185, NA19904, HG00311, HG00158, NA20541, HG00281, HG00139, NA20539, HG00277, HG01069, HG01080, HG01067, HG00120, NA20518, HG00335, NA20819, HG01519, HG01170, HG00262, HG00232, HG00309, HG00338, HG01048, NA20342, HG00326, HG00178, NA20757, NA20533, NA20755, NA19921, NA20753, HG00108, NA20818, HG00313, HG00137, HG00133, HG00188, HG00154, HG00149, NA20535, HG00731, NA20800, HG00268, HG00176, HG01171, HG00282, HG00328, HG00245, HG00190, NA20809, NA20521, NA20760, NA20536, HG00368, NA20314, NA19982, HG00320, HG00263, HG00275, NA20519, HG01102, HG00324, HG00284, HG00250, NA20581, NA20538, HG01182, HG00117, HG00321, HG01334, HG00276, HG00146, NA20828, HG00246, HG00126, NA19625, HG01107, NA20534, HG01075, NA20765, NA20799, NA20773, HG00155, NA20801, HG00254, HG01190, HG00336, HG00265, NA20276, NA19712, HG00366, HG00353, HG00734, HG00136, NA20804, HG01174, NA20790, NA20530, NA19835, NA20792, NA20778, HG00237, NA20504, HG00319, HG01108, NA20803, HG00339, HG00269, HG00125, NA20341, NA19818, NA20348, HG00312, NA20582, HG00342, HG00267, NA19713, HG00174, NA20510, NA20289, NA20786, HG00112, HG00131, NA20758, NA20826, HG00343, NA20528, NA19900, HG00377, HG00372, HG00252, NA20502, HG01082, HG00171, NA20322
Known GenesKGFLP2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2669960
Frequency
Sample Size1151
Observed Gain0
Observed Loss208
Observed Complex0
Frequencyn/a


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