A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2669166



Internal ID9935271
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:5763343..5788052hg38UCSC Ensembl
chr11:5784573..5809282hg19UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3824710
hg1924710
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv189e199
Supporting Variantsessv5976287, essv6504070, essv6280989, essv5613619, essv6421070, essv6262099, essv6459598, essv6327490, essv5420946, essv6056479, essv5495417, essv5403330, essv6351629, essv6573750, essv5834329, essv5623795, essv6217877, essv5943040, essv6130275, essv5408925, essv5514985, essv6576024, essv6315616, essv5869632, essv6194759, essv6516851, essv5975713, essv5498365, essv6374666, essv6190630, essv6366269, essv6416061, essv6546135, essv5870018, essv6465272, essv6460483, essv5888468, essv6235065, essv5675334, essv5868078, essv5964546, essv5897880, essv5465171, essv5637570, essv6005890, essv6148171, essv6264001, essv5705911, essv6430066, essv6103529, essv6313107, essv6014065, essv6591169, essv6228253, essv6550932, essv5677442, essv5841161, essv5931277, essv5611768, essv6097542, essv6590814, essv5531373, essv5605630, essv5759531, essv6237007, essv5439283, essv6189939, essv6249559, essv6318046, essv6543877, essv5984132, essv6436758, essv5707058, essv5863416, essv5436815, essv6554277, essv5486275, essv5977264, essv5798384, essv6428360, essv5746544, essv5746393, essv5507319, essv5510989, essv5523333, essv5928773, essv5847033, essv6526626, essv5478462, essv5710396, essv6031013, essv6067910, essv5457133, essv5496957, essv5881510, essv6449856, essv5606306, essv5544985, essv5493458, essv5586659, essv5489550, essv5824599, essv6206255, essv6088314, essv5638671, essv6171753, essv6328276, essv6409188, essv6185458, essv6535401, essv5449162, essv5781483, essv5735086, essv6436921, essv6415738, essv6029522, essv6004640, essv5949952, essv6067481, essv5442126, essv5903269, essv6578957, essv5926622, essv5665364, essv5775780, essv5597599, essv6060658, essv6139244, essv6210628, essv5403766, essv6142278, essv6549902, essv5632097, essv6136594, essv6460033, essv6250785, essv5850160, essv5462501, essv5716468, essv6376550, essv6152389, essv6454258, essv5985459, essv6524084, essv6546693, essv6020049, essv5632195, essv6198158, essv5689108, essv5502796, essv6157179, essv6104377, essv6528270, essv5912164, essv5424911, essv5986700, essv6218148, essv6320290, essv5472241, essv6005627, essv6392318, essv6501339, essv6401530, essv5574358, essv5413401, essv5685728, essv6351406, essv5793431, essv5692346, essv6285868, essv6373101, essv5989853, essv6307627, essv5704390, essv6189193, essv5808064, essv5423714, essv6007715, essv5537925, essv6109492, essv6042422, essv5933335, essv6007601, essv5445420, essv5913706, essv6473384, essv6322929, essv6468422, essv5850512, essv5733213, essv5675269, essv5888843, essv6128113, essv5922532, essv5772917, essv6500763, essv6428032, essv5686969, essv6145746, essv5639929, essv5567075, essv5675680, essv6167425, essv6500718, essv5553205, essv6114913, essv6224433, essv6532881, essv5690722, essv5605426, essv6075708, essv5407953, essv6587405, essv6183874, essv5586503, essv5734281, essv6293237, essv5915350, essv5839854, essv6267862, essv6161133, essv5590848, essv6436822, essv6072734, essv6324822, essv5607553, essv5925404, essv6507305, essv6303446, essv5606139, essv5744595, essv5946496, essv6352315, essv5900462, essv5690331, essv5712973, essv5799684, essv6347863, essv6130811, essv5946383, essv6458490, essv6461221, essv5960287, essv6038682, essv5645016, essv6189907, essv5944456, essv6104422, essv5936062, essv6259799, essv6247974, essv5686186, essv6099757, essv5768849, essv5522850, essv5814682, essv5920536, essv5724057, essv6548253, essv6512071, essv5779680, essv6303886, essv5689565, essv5735427, essv5586308, essv5754073, essv5474631, essv6182497, essv6442671, essv6359267, essv5961089, essv6589971, essv5430314, essv5905694, essv5955486, essv5695896, essv6244178, essv5779230, essv5603948, essv5766909, essv6039597, essv5972832, essv6383050, essv5826901, essv6219460, essv6409238, essv6393007, essv5462856, essv6156190, essv5846294, essv6196299, essv6576171, essv5677401, essv6366426, essv6383736, essv6188862, essv5407191, essv5508464, essv5567992, essv6418773, essv5680753, essv5951956, essv6578590, essv5975732, essv6108920, essv6573579, essv6128967, essv5909502, essv5715862, essv5793799, essv6118951, essv5706077, essv6040197, essv6411618, essv6534225, essv5665940, essv5479482, essv5998875, essv5667387, essv5973894, essv6243201, essv5771490, essv5600712, essv6317628, essv5620735, essv6182590, essv5710300, essv6293334, essv5633062, essv5931127, essv6323985, essv5441191, essv6150997, essv6280022, essv5738103, essv5694289, essv5811717, essv5416328, essv5869679, essv5518245, essv6094174, essv6534004, essv5795589, essv5716708, essv6375916, essv6352418, essv5559580, essv6132467, essv5419827, essv5505602, essv5776062, essv5855984, essv5877969, essv6135224, essv5794896, essv6051458, essv5595765, essv5781874, essv5590563, essv6280463, essv5937410, essv6225764, essv5511359, essv5859188, essv6583382, essv6174865, essv5951303, essv6006679, essv6390240, essv6481772, essv6474384, essv6571472, essv5970322, essv5504161, essv5596296, essv5927895, essv5623541, essv6341209, essv5936410, essv6019602, essv6538584
SamplesNA20509, NA19394, NA19701, NA20761, HG00542, NA12717, NA19058, NA12842, NA19703, HG01462, HG00608, NA18621, NA20766, NA12286, NA20508, NA19664, HG00671, NA10851, NA12273, NA20783, NA18565, NA12843, HG01066, HG00315, NA12751, NA19355, NA20332, NA19377, NA18959, HG00737, HG00449, HG00654, NA19443, NA19920, HG00261, NA18510, NA12750, NA18602, HG01522, NA19107, HG00663, NA19446, HG00138, NA19373, NA18940, NA18519, HG00589, HG00272, NA20798, HG01351, HG01177, NA19678, NA20756, NA20795, NA18574, HG01083, HG01365, HG00334, HG00185, HG00243, NA19130, NA19079, HG00158, NA11930, HG00512, HG00281, HG01080, NA20518, HG00335, HG00325, HG00232, NA19372, NA11994, NA19235, NA19172, NA19722, HG00160, NA18990, NA19239, NA18985, NA20342, HG00326, NA20757, NA20127, NA19985, HG00253, NA20753, HG01124, HG00137, NA18951, NA18605, HG00731, HG00266, HG01171, HG00380, HG00282, NA19070, NA19403, NA18933, NA20521, HG00657, NA20760, HG00368, NA20314, HG00344, HG00263, NA12718, NA20519, NA18871, NA18572, NA18534, HG00692, NA18907, NA19654, HG00324, NA19461, HG00404, HG00479, NA06989, HG01101, NA18553, NA19761, NA19009, HG00152, HG00146, NA18963, NA19682, NA12144, HG00463, NA12778, NA18570, HG00126, NA19625, HG01107, HG01075, HG01148, HG00611, NA18632, NA19652, HG00155, NA19440, HG00336, NA20276, NA19434, NA18564, NA19747, NA18628, NA20815, NA12272, NA19444, NA20520, NA19010, HG00098, NA20530, NA20527, HG00237, NA19679, NA19428, NA19311, HG01113, HG01137, HG00116, NA18610, NA12347, HG00339, NA18501, HG00614, HG00478, HG00259, NA19779, HG00342, HG00267, NA20510, NA18609, NA18873, HG00112, NA19770, HG00280, NA19780, NA19900, HG00377, NA20503, HG00147, NA19129, HG00171, NA20585, NA20754, NA19429, HG00581, NA18577, NA18620, HG01060, HG00114, NA19648, HG00536, HG00249, NA19466, NA11995, HG00361, HG00524, HG00187, NA18507, NA11933, NA18599, HG01374, HG00306, HG00318, NA18486, HG00699, NA12004, NA19777, NA19057, NA18596, HG01456, NA18606, HG00179, HG00177, NA20507, NA18870, NA12155, HG01140, NA12413, NA12341, HG01250, NA19746, NA19396, HG00127, NA19660, NA20796, NA19005, NA19382, NA18489, NA19448, HG01488, HG00702, HG00173, NA19198, NA18619, HG00330, HG00634, HG00736, NA19197, HG01354, NA19313, HG00369, HG00270, NA20513, NA18611, NA19404, NA12761, HG01134, NA12282, HG00277, NA19651, HG01067, HG00120, NA19383, NA18874, HG00106, HG00236, NA19137, NA20340, NA19371, NA18560, NA19731, NA19075, NA18617, NA19471, NA19159, HG00309, HG00182, HG00427, NA19189, NA12828, NA19456, HG00178, NA20533, NA18908, NA18638, HG00739, HG00464, HG00108, HG00260, NA20818, NA18614, HG01353, HG00543, HG00313, HG00188, NA18544, HG00560, NA19247, NA18613, HG01187, NA19707, NA18934, HG00596, HG00145, HG01384, HG00328, NA19077, NA12003, HG00428, NA19462, HG00653, HG00701, HG01515, NA20536, NA19236, HG00533, NA20506, NA20126, NA19658, NA20344, HG00619, HG00635, HG01094, NA20299, NA19655, HG01197, NA18499, HG00117, HG00613, HG00321, NA18853, HG00276, NA19225, NA20828, HG00141, NA18634, NA20534, NA19675, HG01204, NA18576, NA20765, HG00124, NA20801, NA12716, HG00119, HG00285, NA18950, HG00375, HG00357, HG01253, NA19435, NA20804, NA19773, NA20785, NA20504, NA19786, HG00319, HG01108, NA20803, NA20797, HG00256, NA06986, HG00269, NA19818, NA19759, HG00111, HG00578, NA19248, HG00312, NA19472, NA19060, HG00329, NA12749, NA19713, HG01254, NA20807, HG00131, NA19726, NA18552, NA19755, NA20322, NA18511, HG01097, HG00554, HG00180, HG01061, NA12776
Known GenesOR52N1, OR52N5
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2669166
Frequency
Sample Size1151
Observed Gain0
Observed Loss381
Observed Complex0
Frequencyn/a


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