A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2668759



Internal ID9934864
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32486839..32573445hg38UCSC Ensembl
Outerchr6:32486468..32573815hg38UCSC Ensembl
Innerchr6:32454616..32541222hg19UCSC Ensembl
Outerchr6:32454245..32541592hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3887348
hg1987348
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1100e199
Supporting Variantsessv6179208, essv5834186, essv5442497, essv6395836, essv6509237, essv6087568, essv6194544, essv6423697, essv5741216, essv5740096, essv6156321, essv6563360, essv5735973, essv5782562, essv6244234, essv6154071, essv5657797, essv6441779, essv6069248, essv5755509, essv6012987, essv5520734, essv5531556, essv5722884, essv5506324, essv5824143, essv6523765, essv6003558, essv6157121, essv5768078, essv5871183, essv6084244, essv5402057, essv5585107, essv5709958, essv6277066, essv6343122, essv5851728, essv6586061, essv5435518, essv5789072, essv5955305, essv6551505, essv6524021, essv6536916, essv6035679, essv6077935, essv6194258, essv5724528, essv5611338, essv5728681, essv6021265, essv5522464, essv5697784, essv5994579, essv6327821, essv5740513, essv5736587, essv6132781, essv6134732, essv6376930, essv5895907, essv6062618, essv6192573, essv6140192, essv5954721, essv6175765, essv6016287, essv5961956, essv5800944, essv6298119, essv6397964, essv6455524
SamplesNA19394, NA19397, NA19466, NA19399, NA19332, NA19350, NA19359, NA19355, NA19393, NA19377, NA19443, NA19446, NA19374, NA19396, NA19381, NA19373, NA19379, NA19319, NA19382, NA19315, NA19448, NA19457, NA19313, NA19384, NA19404, NA19383, NA19372, NA19371, NA19471, NA19317, NA19456, NA19445, NA19437, NA19462, NA19347, NA19391, NA19327, NA19455, NA19461, NA19449, NA19453, NA19338, NA19452, NA19469, NA19436, NA19401, NA19375, NA19440, NA19390, NA19434, NA19473, NA19435, NA19444, NA19380, NA19334, NA19470, NA19428, NA19324, NA19311, NA19467, NA19360, NA19376, NA19398, NA19328, NA19438, NA19472, NA19468, NA19474, NA19430, NA19316, NA19463, NA19346, NA19431
Known GenesHLA-DRB5, HLA-DRB6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2668759
Frequency
Sample Size1151
Observed Gain0
Observed Loss73
Observed Complex0
Frequencyn/a


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