A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2668569



Internal ID9587988
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:6533305..6535411hg38UCSC Ensembl
Outerchr19:6532734..6535881hg38UCSC Ensembl
Innerchr19:6533316..6535422hg19UCSC Ensembl
Outerchr19:6532745..6535892hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg383148
hg193148
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6121350, essv5509138, essv6097161, essv5805734, essv5712479, essv6494738, essv5437896, essv6199903, essv6050865, essv6463629, essv5430526, essv5585641, essv6455060, essv5829999, essv6429905, essv5820170, essv6177105, essv6048549, essv5553714, essv6333647, essv6449759, essv5554358, essv6466228, essv5399177, essv6287891, essv6522010, essv6552784, essv5749337, essv6423062, essv5824967, essv6197398, essv5643440, essv6125789, essv5400096, essv6322758, essv5893987, essv5413781, essv5626299, essv6318404, essv5796396, essv6405822, essv6235255, essv5585622, essv6308534, essv5939683, essv6265103, essv5598676, essv6184782, essv5709347, essv5550027, essv6250068, essv5413058, essv6243881, essv6492777, essv6466118, essv5483817, essv5664060, essv5420906, essv5619442, essv6062303, essv5458759, essv6468974, essv6016532, essv6015859, essv5527708, essv6112376, essv5811396, essv5576918, essv6489520, essv5682606, essv5761576, essv5521477, essv5409766, essv5809156, essv6572964, essv6411261, essv5945488, essv6127740, essv5914203, essv5404405, essv6188163, essv6576658, essv6470139, essv6195201, essv6190376, essv5900350, essv6313767, essv5701067, essv6028247, essv5726981, essv5479856, essv5929666, essv6594907, essv6581304, essv5453270, essv5748453, essv5979808, essv5756451, essv6458220, essv6557589, essv6293708, essv5899150, essv6137967, essv5984998, essv5624043, essv5681923, essv5888975, essv6302135, essv5821944, essv5738319, essv5414965, essv5633373, essv6346573, essv6540697, essv5858452, essv6080372, essv5903627, essv5402061, essv5577254, essv5975525, essv5568741, essv5528379, essv5710531, essv6290605, essv5776481, essv6521412, essv5927651, essv5712295, essv5406890, essv5590017, essv6304464, essv6447005, essv5790806, essv5902510, essv5628461, essv6387285, essv5527788, essv6270330, essv5691665, essv5417100, essv6584527, essv6462285, essv5798536, essv5860506, essv5471014, essv6461275, essv5921319, essv5586537, essv5753725, essv6184066, essv6337757, essv6134249, essv6434201, essv6368851, essv5938021, essv6431203, essv6346585, essv6010491, essv5687727, essv6256704, essv5589829, essv5476015, essv6509952, essv5467327, essv6157300, essv6334024, essv5882874, essv5796034, essv6449175, essv6033040, essv5609731, essv5477122, essv5647543, essv5439053, essv6031278, essv6404441, essv6184305, essv5975114, essv5446030, essv6503714, essv5528798, essv5478887, essv5719336, essv5585978, essv5634733, essv5931250, essv6533870, essv5674711, essv6532172, essv6060075, essv5845247, essv5528874, essv5734425, essv6422564, essv5583103, essv6398841, essv6272400, essv5613927, essv5712286, essv6412808, essv6365090, essv6185986, essv5727979, essv6476746, essv6420814, essv6330393, essv5534190, essv5449394, essv5820045, essv5943343, essv5464518, essv5452085, essv5566560, essv6204994, essv6295172, essv6228248, essv5541032, essv5580885, essv5980532, essv5691046, essv6262894, essv5848389, essv5518555, essv6408655, essv5607073, essv5905284, essv5695451, essv5963297, essv6465684, essv5517776, essv5981124, essv6284241, essv5598208, essv6379655, essv5573868, essv5784726, essv5584544, essv6278066, essv5963436, essv6597093, essv5583384, essv6159516, essv5851615, essv5890414, essv5779112, essv6131247, essv5530103, essv6500297, essv6546624, essv6559834, essv5946897, essv6150712, essv6430423, essv6164412, essv5688738, essv6064296, essv6175792, essv6278013, essv5868628, essv5972316, essv5936812, essv6537429, essv5626459, essv6063054, essv5619690, essv6506251, essv6378228, essv5849462, essv5530090, essv5689750, essv5711141, essv5419876, essv6593010, essv6189506, essv6477130, essv5834830, essv6301813, essv5669982, essv6171219, essv5888672, essv6147930, essv5971952, essv5962905, essv5859844, essv5690016, essv6245459, essv6463855, essv5982837, essv6278529, essv6526156, essv6296824, essv5936700, essv5598066, essv6254659, essv5529103, essv5634937, essv5628116, essv6583978, essv6131544, essv6066951, essv6517808, essv6308764, essv5788849, essv5649636, essv5706030, essv5591284, essv6550638, essv5453491, essv5790560, essv5591648, essv6588439, essv5611598, essv6104362, essv5958430, essv5557762, essv6196252, essv6197812, essv6432611, essv6034464, essv6564414, essv5796965, essv5984471, essv6592774, essv6388270, essv5914121, essv5490138, essv6181859, essv6299935, essv5425537, essv6130317, essv6184561, essv6526236, essv6552807, essv6556475, essv6097532
SamplesHG00189, NA19701, HG00650, HG00542, HG00442, HG01173, HG00143, NA19703, HG01462, HG00608, NA19909, HG00671, HG00242, HG00257, HG01066, HG00315, HG00233, HG00244, HG00181, NA20332, HG00737, HG00449, HG01461, HG00654, HG01051, NA19920, HG00261, HG00693, HG00337, HG00271, HG00663, HG00641, HG00138, HG01350, HG00589, HG00122, HG01351, HG01167, HG01168, HG01492, HG01083, HG01365, HG00334, HG00185, NA19904, HG00537, HG00243, HG00158, HG00512, HG00281, HG00139, HG01069, HG01080, HG00335, HG00148, HG00156, HG00325, HG00232, HG00534, HG00705, HG00160, HG00118, HG01198, HG01048, HG00326, NA20127, HG00323, HG01550, HG00253, NA19921, HG01124, HG00137, HG00154, NA19908, HG00731, HG00443, HG00268, HG00266, HG01171, HG00282, HG00557, HG00732, HG01095, HG00657, NA20314, HG00556, HG00583, HG00344, HG00263, HG00275, HG01149, HG00692, HG00740, HG01047, HG01102, HG00324, HG00284, HG00651, HG00250, HG00690, HG00404, HG00531, HG00479, HG00331, HG00684, HG01101, HG00140, HG01334, HG00152, HG00146, HG00704, HG00463, HG00246, HG00126, NA19625, HG01107, HG01075, HG01148, HG00258, HG00611, HG00155, HG00254, HG00336, HG00625, NA19712, HG00353, HG00580, HG00734, HG01357, HG01174, HG01375, NA19835, HG00473, HG00237, HG01137, HG00116, HG00662, HG00418, HG01489, HG01342, HG00620, HG00339, HG00614, HG00513, HG00478, HG00259, HG00342, HG00310, HG00112, HG00280, NA19711, NA19900, HG00377, HG00274, HG00595, HG01125, HG00628, HG01437, HG00581, HG00626, HG00403, HG01060, HG00114, HG01441, NA19700, HG00592, HG01098, HG01356, HG00536, HG00231, HG00249, HG00361, HG01359, HG00524, NA19914, HG01052, HG00187, HG01079, HG00100, NA19704, HG01188, HG01389, HG01374, HG00640, HG00367, HG00318, HG01465, HG00699, NA19819, HG00566, HG00179, NA20346, HG00177, HG00150, HG01140, HG00327, HG01366, HG01070, HG00251, HG00501, HG01488, HG00702, HG00689, HG00448, HG00173, NA19916, HG00330, HG00634, HG00736, HG00610, HG00346, HG01354, HG00247, HG00270, HG00590, HG01134, HG00277, HG01067, HG00120, HG00683, HG00106, HG01170, HG00236, NA19917, HG01072, HG00422, HG01176, HG01440, HG00309, HG00182, HG00427, NA19901, HG00338, HG00159, HG00178, HG00530, HG00419, HG00464, HG00108, HG00260, HG01353, HG00543, HG00313, HG00133, HG01183, HG01136, HG00188, HG00149, HG00560, HG00629, HG00183, HG00176, HG01187, NA19707, HG00596, HG01384, HG00328, HG00428, HG00653, HG00577, HG00701, HG00475, HG00436, NA19982, HG00320, HG00584, HG00533, HG00500, NA20344, HG00619, HG00708, HG00635, HG01390, HG01073, HG00273, HG01197, HG01383, HG01182, HG00613, HG00525, HG00321, HG00157, HG00276, HG00141, HG01204, HG00476, HG00124, HG00119, HG01190, HG00285, NA19834, HG00366, HG00375, HG00357, HG01253, HG00136, HG00638, HG00278, HG00607, HG00319, HG01108, HG00256, HG00269, HG00125, NA20341, NA19818, HG00707, HG00672, HG00111, HG00578, HG01491, HG00421, HG00329, HG00656, NA19713, HG01055, HG00174, HG00123, HG00186, HG00698, HG00131, HG00343, HG01251, HG00372, HG00252, HG01377, HG00472, HG01378, HG01082, HG00345, HG00554, HG01191, HG00180, HG01061, HG00437
Known GenesTNFSF9
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2668569
Frequency
Sample Size1151
Observed Gain0
Observed Loss335
Observed Complex0
Frequencyn/a


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