A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2668413



Internal ID2901500
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32603739..32657945hg38UCSC Ensembl
Outerchr6:32603368..32658315hg38UCSC Ensembl
Innerchr6:32571516..32625722hg19UCSC Ensembl
Outerchr6:32571145..32626092hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3854948
hg1954948
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6532044, essv6238859, essv6097351, essv5395827, essv5896558, essv6557464, essv6480654, essv5810108, essv6060202, essv5924338, essv5875028, essv6000255, essv5556718, essv6297845, essv5691181, essv5921378, essv5970454, essv5990208, essv6348824, essv5849958, essv6250196, essv5652090, essv6418329, essv5606854, essv5942795, essv6118760, essv5478259, essv5994495, essv5897650, essv6105105, essv6308939, essv6470861, essv6205276, essv5868055
SamplesHG00613, HG00537, HG00536, HG00418, HG00500, HG00464, HG00596, HG00463, HG00614, HG00428, HG00683, HG00404, HG00578, HG00592, HG00556, HG00421, HG00583, HG00610, HG00692, HG00689, HG00620, HG00559, HG00534, HG00427, HG00595, HG00611, HG00650, HG00608, HG00708, HG00566, HG00690, HG00473, HG00476, HG00671
Known GenesHLA-DQA1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2668413
Frequency
Sample Size1151
Observed Gain0
Observed Loss34
Observed Complex0
Frequencyn/a


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