A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2668403



Internal ID9587822
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:151410172..151413065hg38UCSC Ensembl
chr5:150789733..150792626hg19UCSC Ensembl
Cytoband5q33.1
Allele length
AssemblyAllele length
hg382894
hg192894
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1049e199
Supporting Variantsessv5786115, essv6305294, essv5813983, essv5805951, essv5903105, essv6463887, essv6113261, essv6517353, essv6078671, essv6558573, essv5565715, essv6487839, essv6050550, essv5829245, essv6396620, essv6333131, essv5675107, essv5462214, essv5807656, essv6596988, essv6325217, essv6461202, essv6491896, essv6590955, essv5458569, essv6341592, essv5720897, essv5657722, essv5867981, essv5552503, essv5472755, essv6132830, essv5875073, essv5943272, essv6324207, essv6273679, essv5997537, essv6428277, essv5759949, essv6165508, essv5953511, essv6555072, essv5870484, essv5402469, essv5518413, essv5946443, essv6141999, essv5504818, essv5439415, essv6563301, essv6540818, essv6519660, essv5491769, essv6561528, essv5440674, essv6595099, essv6330361, essv6508529, essv5928093, essv6013675, essv6584986, essv6283814, essv6169954, essv5445760, essv6012002, essv6098340, essv6467532, essv6124472, essv5947198, essv6022830, essv5606448, essv6141832, essv5808594, essv5601712, essv5695780, essv5835085, essv6318860, essv5757094, essv6356879, essv6019842, essv6063287, essv6010529, essv5994257, essv5560965, essv6249918, essv5709402, essv5642155, essv5894530, essv6155002, essv6024285, essv5677874, essv6380061, essv6136256, essv5586830, essv5898269, essv5826402, essv6291964, essv6253220, essv5900036, essv5595243, essv5936779, essv6565149, essv6014597, essv5506333, essv6336024, essv6167389, essv6122403, essv6165168, essv5836355, essv6587624, essv6120492, essv6034123, essv5886678, essv5642715, essv6157167, essv5934690, essv5449197, essv5810860, essv6304581, essv6256017, essv5847948, essv5734298, essv5732699, essv5438724, essv5795392, essv6571018, essv6100719, essv5826177, essv6212446, essv6000310, essv5917974, essv6423777, essv5957665, essv6255588, essv5803948, essv5653691, essv6393792, essv5836354, essv5732091, essv5946656, essv6446698, essv6377011, essv5536207, essv5799476, essv5527086, essv5716107, essv6266534, essv6065202, essv5706332, essv6189609, essv5574845, essv5578649, essv6511037, essv5438794, essv6045957, essv5853303, essv6110220, essv5681026, essv5414974, essv5396082, essv5742947, essv5835685, essv5399808, essv5987653, essv5452132, essv6289021, essv5600680, essv6587462, essv6085026, essv6577297, essv6385668, essv5622189, essv6450290, essv5777237, essv5830344, essv5614718, essv5553501, essv5494713, essv6174924, essv6229780, essv5447818, essv5707926, essv5987123, essv5671589, essv5708636, essv5498880, essv6017145, essv6506762, essv5966359, essv5636445, essv6089894, essv6379731, essv5545527, essv6508765, essv5503166, essv6219332, essv6175479, essv6585636, essv5998561, essv5559740, essv6246994, essv6076804, essv6329616, essv6210213, essv5955661, essv6322610, essv5605061, essv6464250, essv6025548, essv5843373, essv5460799, essv5738650, essv6343331, essv6079052, essv6274432, essv6488419, essv6219471, essv5902793, essv6256517, essv6016060, essv5652793, essv5848251, essv6284150, essv5399239, essv6378880, essv6332170, essv5909113, essv6513324, essv5532872, essv5405755, essv6358263, essv6432353, essv5898325, essv6371390, essv5916925, essv6548354, essv6181958, essv5682499, essv6144237, essv6172261, essv5640935, essv6439216, essv6254801, essv5537171, essv6173098, essv5899829, essv5780194, essv5817597, essv5941750, essv5633225, essv5460037, essv5982070, essv5787276, essv6038532, essv5927452, essv5713931, essv6121131, essv5699203, essv6163103, essv6186877, essv6529735, essv5736102, essv5521183, essv6253637, essv5421179, essv6559859, essv6053477, essv5766189, essv6461641, essv6468719, essv5433282, essv6208764, essv6506387, essv5984255, essv5674258, essv6161665
SamplesNA19701, HG00542, NA19058, HG00143, NA19703, HG00608, NA18621, HG00671, NA19066, HG00559, NA18565, NA12843, NA18999, NA20512, NA19355, NA20332, NA18530, NA18959, HG00737, HG01461, HG00654, NA19443, HG01051, NA18633, NA19067, NA18602, NA18627, HG00337, NA19107, NA20814, NA07346, NA18563, NA18940, HG00122, NA18597, HG01177, HG01167, NA20774, HG01168, NA18916, NA18574, NA07347, NA19457, HG01083, HG00334, NA19384, HG00537, NA20291, NA19079, HG00512, HG00139, NA20539, HG01069, HG01080, HG00156, NA18868, NA11932, NA19372, NA11994, HG00534, NA19722, HG00118, NA18985, HG00326, NA18867, NA19789, HG00137, HG00154, HG00443, NA18538, HG01171, NA19056, NA19403, HG00557, HG00732, HG00657, NA20760, HG00583, HG00275, NA18572, HG00551, NA12234, HG00692, NA18548, HG00651, HG00250, HG00690, HG00331, NA19453, NA18532, HG01497, NA19059, NA18555, HG00146, NA19452, NA18963, HG00704, NA19682, NA19395, NA18570, NA19625, NA18593, NA12546, NA18541, NA12043, HG01148, NA18632, NA19652, NA19390, HG00265, NA19147, NA18564, NA18628, NA19072, HG01551, NA19331, NA19010, HG01357, NA19835, HG00473, NA19311, HG01137, NA19083, HG00662, HG00418, HG01489, HG00620, HG00614, HG00513, HG00478, HG00259, NA19779, NA19716, NA18636, NA18609, HG00280, NA11843, NA19780, NA18983, NA18989, HG01125, NA18624, NA19463, NA19063, NA19065, NA18612, NA19074, HG01516, HG00593, HG00626, HG00592, HG01356, NA20543, NA19055, HG00536, HG00231, NA19397, HG00249, NA18592, HG01359, HG00524, NA19914, HG00187, NA18561, NA19704, HG01188, NA18599, HG01389, NA19057, NA18596, NA12058, NA18606, HG00177, NA12400, HG01140, NA12341, HG00327, NA19381, HG00501, NA19382, NA19762, NA19728, HG00702, HG00689, HG00173, NA18982, HG00330, HG00634, HG00610, NA19088, HG00247, NA19138, NA19054, HG01110, HG00590, HG01455, HG00120, NA18977, NA18560, NA19731, NA19075, HG00422, NA19087, HG01440, NA19002, HG00427, NA19725, HG00178, NA18973, HG00530, HG00419, HG00260, NA19007, NA18614, NA10847, HG00543, NA18544, HG00560, NA18613, HG00629, HG01360, HG00596, HG00328, NA19077, HG00701, NA19391, NA18991, HG00475, HG00436, NA18637, NA19788, NA18630, HG00619, HG00708, HG01094, NA19000, HG01197, HG00613, HG00276, NA18536, NA18634, NA18945, NA18546, NA18535, HG00285, NA19834, NA18559, HG00565, HG00366, NA18941, HG00278, NA19773, NA19380, NA19334, HG00256, HG00269, HG00125, NA19759, NA19078, HG00707, NA20582, NA19472, NA18987, HG00656, HG00698, HG00131, NA19726, NA18984, NA07056, HG01378, NA19755, NA18488, HG01082, NA18549, HG01191, NA18622
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2668403
Frequency
Sample Size1151
Observed Gain0
Observed Loss276
Observed Complex0
Frequencyn/a


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