A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2668321



Internal ID9934426
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32548867..32573811hg38UCSC Ensembl
Outerchr6:32548818..32573873hg38UCSC Ensembl
Innerchr6:32516644..32541588hg19UCSC Ensembl
Outerchr6:32516595..32541650hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3825056
hg1925056
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1107e199
Supporting Variantsessv5996725, essv6504705, essv6573118, essv6092213, essv6308686, essv6562818, essv5987095, essv5653835, essv5581903, essv5515995, essv5800057, essv6480857, essv5913945, essv5859894, essv6285945, essv5968385, essv5744925, essv6490981, essv5945006, essv5879640, essv6351178, essv5943337, essv5536991, essv6333016, essv5652069, essv6063228, essv6116195, essv5879326, essv6180159, essv6129669, essv6044136, essv5906441, essv5475381, essv5994367, essv5473734, essv6202872, essv6248479, essv6198573, essv5767584, essv6209919, essv6385913, essv5917209, essv5489529, essv6566257, essv5892426, essv6537432, essv5512727, essv6408942, essv6091384, essv5492182, essv5928772, essv6216984, essv5427572, essv6516956, essv5411425, essv5822632, essv5670495, essv5842670, essv6351484, essv5756145, essv5496186, essv5892316, essv6465377, essv6492999, essv5790956, essv6276987, essv5785036, essv6248969, essv5888457, essv6171302, essv6069999, essv5873487, essv6556636, essv6097711, essv5831873, essv6192765, essv5628435, essv6304989, essv6164309, essv5784803, essv5620366, essv6350623, essv5891093, essv5777702, essv6386894, essv6148990, essv5907454, essv6583749, essv6147709, essv6357188, essv5448154, essv6474504, essv6055774, essv5486748, essv5670584, essv5542298, essv5509513, essv5991514, essv6528094, essv6164154, essv5437824, essv5529320, essv5521748, essv5682631, essv6284605, essv5625213, essv5538295, essv6580438, essv5573034, essv6341520, essv5630011, essv5432492, essv6522241, essv5879172, essv5714759, essv5689613, essv5530837, essv6304302, essv6101645, essv5883369, essv5485141, essv6376383, essv5504677, essv6421790, essv5935572, essv6243732, essv6360539, essv5839435, essv5747624, essv5536672, essv6142223, essv6213565, essv5717622, essv5719775, essv6010765, essv5683185, essv6165737, essv5575330, essv6473727, essv6473616, essv5846351, essv6132760, essv5880268, essv5875801, essv5720543, essv5556170, essv5405271, essv6343114, essv5941855, essv6457406, essv5696251, essv5676986, essv5454581, essv5901700, essv6122653, essv5779685, essv5627869, essv6471564, essv6057119, essv6238235, essv5889486, essv6176533, essv5605096, essv6262688, essv5738742, essv5770043, essv6321470, essv5971845, essv5510042, essv6355450, essv6128176, essv5999208, essv5500667, essv5765042, essv6458783, essv5820525, essv6324528, essv5937952, essv6419572, essv5866858, essv5495336, essv6582574, essv6361087, essv6423363, essv5408312, essv6256159, essv6027716, essv5593239, essv5979550, essv6208744, essv6027916, essv5681869, essv6267139, essv6414243, essv6006263, essv5865017, essv5401719, essv5717474, essv5438837, essv5463760, essv5441451, essv6038289, essv6511521, essv6002322, essv5823371, essv6427565, essv5813526, essv6566013, essv6543683, essv6042161, essv5583872, essv5531811, essv6594575, essv6321863, essv6436054, essv5948601, essv5906964, essv5948431
SamplesNA18522, NA19065, HG01112, HG01191, NA19346, NA19676, HG01516, HG00096, NA20588, HG01060, NA20761, NA12717, HG00442, NA19648, NA11830, NA19700, NA12842, NA18924, HG00671, NA18861, NA18508, NA19399, NA19914, NA20783, NA19332, NA12414, NA19704, NA18507, NA20816, NA20752, NA19092, NA18486, HG00103, NA20294, NA19393, NA19777, HG01456, NA20332, NA19684, NA19377, NA20346, HG00177, HG01461, NA18870, NA18526, NA19920, HG00261, NA12155, HG01522, HG01140, NA18627, HG00327, HG00271, NA20814, NA20537, HG01250, NA19396, HG00138, NA19660, NA19381, NA19373, NA20796, NA19379, NA19005, HG00589, NA19319, NA19382, NA19315, HG01351, HG00448, HG00173, NA20774, NA19723, NA18923, NA19198, HG00330, HG00736, NA11992, NA07347, NA18582, NA18571, HG00247, NA19054, HG00334, NA19782, HG00281, NA20759, NA12282, NA19720, NA19383, HG00335, NA18868, HG00325, NA19719, HG00232, NA19385, NA19901, NA19725, NA19189, NA18973, NA20515, NA19789, NA18539, NA19921, NA20818, NA11831, HG01353, HG00154, NA19247, NA18538, HG01171, NA19056, NA19670, HG00245, NA12342, NA19347, NA18933, HG00732, HG00653, HG01095, NA19327, HG00436, NA19788, NA18579, HG01149, HG00551, HG01390, NA19654, NA18566, HG00284, NA19000, NA19655, HG01197, NA18499, NA20538, NA19453, NA18912, HG00117, HG00140, NA18853, NA18553, HG01497, NA19338, HG00704, NA19682, NA19395, NA18570, NA18541, HG01075, NA20526, NA20296, NA19685, NA18953, NA19401, NA20799, NA18632, HG00124, NA20801, NA18533, HG00119, NA19390, NA18535, HG00336, HG00265, NA19834, NA19712, HG01551, HG01253, NA19435, HG00278, NA20785, HG01174, NA20530, NA19835, HG00237, NA19428, NA19324, HG00319, HG00116, NA19083, NA18943, NA20803, NA19360, NA07037, HG00256, NA19783, NA12763, HG00418, HG00125, NA20341, NA19376, NA19398, NA19328, NA18501, HG00707, HG00578, HG00478, NA19248, NA20582, NA19472, NA19223, NA19779, NA19060, NA20334, NA19716, NA19474, NA18609, NA19726, NA20826, NA19711, HG01377, NA19755, NA18488, HG01111, NA19758, NA19316, HG01125, HG00345
Known GenesHLA-DRB6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2668321
Frequency
Sample Size1151
Observed Gain0
Observed Loss218
Observed Complex0
Frequencyn/a


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