A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2667674



Internal ID9933779
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32487139..32571845hg38UCSC Ensembl
Outerchr6:32486768..32572215hg38UCSC Ensembl
Innerchr6:32454916..32539622hg19UCSC Ensembl
Outerchr6:32454545..32539992hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3885448
hg1985448
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1100e199
Supporting Variantsessv6105316, essv6537395, essv5799372, essv5519589, essv5936242, essv5685761, essv6403056, essv5552953, essv5399458, essv5726314, essv5624470, essv5418042, essv5830658, essv5458006, essv6563848, essv6545650, essv5871659, essv6232814, essv6409407, essv6483676, essv6374623, essv5678482, essv6171438, essv5526387, essv6166194, essv6382475, essv5559915, essv5647932, essv6354734, essv5466681, essv6331007, essv6159301, essv5915933, essv5532648, essv6301301, essv6139315, essv6368241, essv6272569, essv6056538, essv5638277, essv5453995, essv6470027, essv5445227, essv5712770, essv5741155, essv5617459, essv6275978, essv5427452, essv5936090, essv6216206, essv5570062, essv6499896, essv5610491, essv5503810, essv5936439, essv6532170, essv5894452, essv6296359, essv6573875, essv6330009, essv6530250
SamplesNA18502, NA18924, NA19204, NA18861, NA18508, NA18507, NA18917, NA18504, NA19190, NA19098, NA18870, NA19171, NA18489, NA19119, NA18923, NA19198, NA19131, NA18916, NA19197, NA18498, NA19130, NA18874, NA18868, NA19235, NA19207, NA19159, NA19189, NA18520, NA19209, NA18908, NA19200, NA18934, NA19152, NA18933, NA19236, NA18516, NA18910, NA18871, NA18907, NA18912, NA18853, NA19257, NA19225, NA18523, NA19160, NA18858, NA18909, NA19108, NA19147, NA18517, NA19144, NA18501, NA19248, NA19223, NA18873, NA19116, NA19213, NA19129, NA18511, NA18522, NA19153
Known GenesHLA-DRB5, HLA-DRB6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2667674
Frequency
Sample Size1151
Observed Gain0
Observed Loss61
Observed Complex0
Frequencyn/a


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