A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2667015



Internal ID9933120
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32486839..32549545hg38UCSC Ensembl
Outerchr6:32486468..32549915hg38UCSC Ensembl
Innerchr6:32454616..32517322hg19UCSC Ensembl
Outerchr6:32454245..32517692hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3863448
hg1963448
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1101e199
Supporting Variantsessv5488392, essv5627010, essv6522683, essv6074902, essv5833088, essv6186020, essv5443979, essv6415605, essv5720727, essv5857251, essv5410924, essv6016735, essv5826877, essv5815688, essv6304300, essv6107858, essv5944043, essv5927179, essv6554312, essv5998708, essv5945114, essv6401405, essv5652759, essv5498625, essv5898160, essv5999749, essv5625398, essv5431455, essv6092140, essv5824146, essv5560380, essv5414548, essv6333426, essv6280816, essv5611173, essv6241656, essv5859517, essv5606074, essv6329257, essv5986325, essv6386132, essv6471334, essv6392849, essv5884671, essv5493975, essv5802173, essv6100823, essv5480678, essv5555361, essv6041151, essv5515151, essv6513230, essv6320399, essv5405036, essv5648236, essv5592899, essv6578236, essv5517413, essv5874805, essv5713389, essv6358224, essv5911089, essv6277764, essv5794596, essv6427186, essv6194050, essv5752326, essv5854550, essv5844534, essv6479285, essv5957050, essv5968052, essv5891767, essv6534341, essv6501120, essv6431298, essv6557531, essv6131318, essv6204939, essv5409816, essv6464907, essv6569322, essv6196621, essv6114125, essv5897740, essv6494604, essv5472886, essv6279745, essv5488793, essv6255487, essv6547418, essv6124430, essv5901322, essv6449299, essv5522784, essv6270350, essv6099544, essv5786755, essv6368928, essv6149997, essv6303388, essv6152861, essv5565750, essv6233497, essv6047701, essv5576687, essv6294542, essv5883307, essv5611572, essv6195410, essv6049348, essv6171620, essv6110927
SamplesNA19701, NA19700, NA19703, NA19909, NA18621, NA18592, NA19914, NA18565, NA18561, NA19704, NA18599, NA20294, NA19819, NA18596, NA20332, NA18606, NA20346, NA18616, NA18526, NA20356, NA19920, NA18633, NA18602, NA18627, NA18563, NA18597, NA18635, NA18567, NA20317, NA19916, NA18547, NA18618, NA18574, NA18582, NA18571, NA20287, NA20336, NA20291, NA18611, NA20278, NA19917, NA20340, NA18560, NA18617, NA19901, NA18557, NA20342, NA20127, NA19985, NA18539, NA19921, NA18638, NA18614, NA18605, NA19908, NA18613, NA18538, NA19707, NA20314, NA19982, NA18637, NA20126, NA18572, NA18534, NA18630, NA20344, NA18548, NA18566, NA20299, NA18626, NA18532, NA18553, NA20282, NA18555, NA18536, NA18570, NA19625, NA18634, NA18593, NA18576, NA18546, NA20296, NA18608, NA18632, NA18542, NA18535, NA19834, NA18559, NA20276, NA19712, NA18564, NA18628, NA19835, NA20281, NA18615, NA20341, NA19818, NA20348, NA18631, NA20334, NA19713, NA20289, NA18609, NA19711, NA18552, NA20322, NA18623, NA18612, NA18549, NA18622, NA18562, NA18577, NA18620
Known GenesHLA-DRB5
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2667015
Frequency
Sample Size1151
Observed Gain0
Observed Loss113
Observed Complex0
Frequencyn/a


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