Variant Details

Variant: esv2666987

Internal ID

9586406

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr1:201690282..201690384	hg38	UCSC Ensembl
Outer	chr1:201690125..201690537	hg38	UCSC Ensembl
Inner	chr1:201659410..201659512	hg19	UCSC Ensembl
Outer	chr1:201659253..201659665	hg19	UCSC Ensembl

Cytoband

1q32.1

Allele length

Assembly	Allele length
hg38	413
hg19	413

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv5398571, essv5634709, essv6370158, essv6498566, essv5699782, essv6574430, essv5778150, essv6214994, essv6455274, essv6505876, essv6288441, essv6094620, essv5709790, essv5802721, essv6548368, essv6536962, essv6496972, essv5941885, essv6308288, essv6240959, essv5526445, essv6145552, essv6219918, essv6134428, essv5869339, essv5454779, essv6386954, essv5481272, essv6410174, essv5637111, essv5560466, essv6461950, essv6094662, essv5676060, essv6231733, essv6521677, essv5831350, essv6328994, essv6562362, essv6491990, essv6089464, essv5822465, essv6182305, essv5793439, essv5842335, essv5621678, essv5938656, essv5502546, essv5452279, essv5429469, essv6345813, essv5484622, essv6490855, essv6135130, essv6293769, essv6158550, essv6291086, essv6132504, essv5795026, essv5762633, essv5858754, essv5752054, essv5566160, essv6227215, essv5799363, essv5903360, essv6537942, essv5436616, essv5893644, essv5537144, essv6024355, essv6414943, essv5829419, essv5977074, essv5499143, essv5540015, essv5709207, essv6270455, essv5726571, essv6239870, essv6558987, essv5717842, essv5424831, essv5900420, essv5852868, essv6366627, essv6202663, essv5940970, essv5428303, essv5806613, essv5606470, essv6068531, essv6305485, essv5624990, essv5863492, essv6047917, essv6133269, essv5602182, essv5881174, essv6403408, essv5467990, essv5813073, essv5655099, essv6217601, essv6545952, essv6058197, essv6279387, essv5521582, essv6379526, essv6192709

Samples

HG00313, HG00152, HG01359, HG00252, HG00318, HG00607, HG00257, HG00182, HG00344, HG01075, HG01055, HG00437, HG01173, HG00369, HG00131, HG01389, HG00463, HG01051, HG00428, HG00375, HG01174, NA19449, HG01350, HG00334, NA18963, HG00280, HG00699, NA18557, NA18950, HG01171, HG00479, NA18596, HG00247, HG01107, HG00339, HG00242, HG01140, HG01375, NA18536, NA18623, HG01048, HG01061, NA18636, HG01124, HG00338, HG00533, NA19774, HG00258, HG01136, NA18637, HG00254, HG00276, HG00357, HG00662, HG00114, NA19786, NA19080, NA19785, HG00108, NA19759, HG00653, HG00325, HG00629, HG00263, NA19731, HG01073, HG00265, HG00501, HG01069, HG00249, HG00277, HG01080, HG01351, HG00513, HG00524, HG00329, HG00512, HG00525, HG01060, HG00377, HG00236, HG00589, NA18543, HG00427, HG00443, HG00650, HG00138, HG00580, NA19719, NA18544, NA19755, NA18548, NA19770, NA19749, HG00285, HG00656, NA19732, HG00422, HG01108, HG00693, HG01125, HG00251, HG00320, HG00275, HG00442, HG01374, HG01102, HG00684, HG00704, HG00278

Known Genes

IPO9-AS1, NAV1

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2666987

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	110
Observed Complex	0
Frequency	n/a