A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2666926



Internal ID9933031
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:177902715..177925221hg38UCSC Ensembl
Outerchr5:177902344..177925691hg38UCSC Ensembl
Innerchr5:177329716..177352222hg19UCSC Ensembl
Outerchr5:177329345..177352692hg19UCSC Ensembl
Cytoband5q35.3
Allele length
AssemblyAllele length
hg3823348
hg1923348
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5765952, essv6522104, essv6427678, essv6086253, essv6572515, essv5980332, essv6589410, essv6110686, essv5929334, essv5431987, essv5939845, essv6495413, essv6490337, essv6364575, essv6327623, essv5755772, essv5897432, essv5552157, essv5610828, essv6357316, essv5945712, essv5650790, essv6286378, essv6366203, essv6071816, essv6048900, essv6267222, essv6213484, essv6553190, essv6568449, essv6392394, essv5536452, essv6369168, essv6240304, essv5542039, essv5767772, essv5663244, essv6117232, essv5451554, essv5636496, essv5459251, essv5705462, essv5683819, essv5404762, essv5968177, essv5783923, essv6485160, essv6292502, essv6319980, essv6142984, essv6041991, essv5592277, essv6288267, essv6276104, essv5456289, essv6182181, essv6357539, essv5579299, essv6346599, essv6175803, essv6411723, essv6104513, essv6566309, essv6399569, essv5960278, essv6286158, essv5646757, essv5758339, essv5743660, essv6231836, essv5579415, essv5760737, essv5867895, essv5915139, essv5896124, essv5646364, essv6229734, essv5529057, essv6227266, essv6169476, essv6509735, essv5402847, essv6488238, essv6065112, essv5903826, essv6267699, essv6110190, essv6591938, essv5965213, essv5798082, essv5901170, essv5667983, essv6121508, essv6023864, essv6229062, essv6412301, essv6093667, essv5747708, essv5976256, essv5681915, essv5999320, essv6307525, essv6568425, essv5747645, essv6256537, essv6190755, essv5863588, essv6033193, essv5523195, essv6472044, essv5728815, essv6493301, essv5421439, essv5775399, essv5777632, essv6373662, essv5429365, essv5748443, essv5713851, essv5490873, essv6403598, essv5485503, essv6103248, essv5932313, essv6444898, essv6198665, essv5702947, essv5690253, essv5809628, essv6518679, essv6166796, essv5879001, essv6393504, essv5559903, essv6535773, essv5638778, essv5731425, essv6265494, essv5635555, essv6142996, essv6123466, essv6356183, essv6089719, essv5739178, essv5792910, essv5477448, essv6343569, essv6469867, essv6106508, essv5457773, essv6511785, essv6169488, essv5706677, essv6322435, essv6306493, essv6556458, essv5967591, essv6174215, essv6462880, essv6166002, essv5496549, essv5482669, essv5954948, essv5937231, essv6256222, essv5720325, essv5562568, essv6296789, essv6414564, essv5906294, essv6507707, essv6491645, essv6215533, essv6426849, essv6069786, essv6560055
SamplesHG00096, HG01060, HG00114, HG01441, HG01173, HG01098, HG01356, HG00143, HG00231, HG01462, HG00142, HG00249, HG00242, HG01359, HG01052, HG01079, HG00100, HG01188, HG00257, HG01389, HG01374, HG01066, HG00151, HG00233, HG00640, HG00244, HG01465, HG00103, HG01456, HG00737, HG00115, HG00150, HG01461, HG01051, HG00261, HG01140, HG01250, HG00641, HG00138, HG00127, HG01350, HG01366, HG01070, HG00251, HG00122, HG01351, HG01488, HG01167, HG01168, HG01492, HG00736, HG01354, HG01083, HG00247, HG01365, HG00243, HG00158, HG01134, HG00139, HG01455, HG01069, HG01080, HG01067, HG00120, HG00148, HG00106, HG01170, HG00236, HG00156, HG01495, HG00262, HG01072, HG00232, HG01176, HG01440, HG00160, HG00118, HG01198, HG00637, HG00159, HG01048, HG01550, HG00253, HG00264, HG00108, HG01124, HG00260, HG01353, HG00137, HG00133, HG01183, HG01136, HG00154, HG00149, HG00731, HG01360, HG01187, HG01171, HG01384, HG00245, HG00732, HG01095, HG01498, HG00263, HG01149, HG00239, HG00740, HG01390, HG01047, HG01102, HG01073, HG00250, HG01197, HG01383, HG01182, HG00117, HG01101, HG00157, HG00140, HG01497, HG01334, HG00152, HG00146, HG00141, HG00246, HG00126, HG01107, HG01204, HG01075, HG01148, HG00258, HG00124, HG00155, HG00254, HG00119, HG01190, HG00265, HG01551, HG01253, HG00734, HG00136, HG00638, HG01357, HG01174, HG01375, HG01494, HG00237, HG01113, HG01137, HG00116, HG01108, HG00256, HG01489, HG01342, HG00125, HG00111, HG01491, HG00259, HG01254, HG01055, HG00123, HG00112, HG00131, HG01251, HG00252, HG01377, HG01378, HG01082, HG01125, HG01112, HG01097, HG00554, HG01191, HG01437, HG01061, HG00553
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2666926
Frequency
Sample Size1151
Observed Gain0
Observed Loss176
Observed Complex0
Frequencyn/a


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