Variant Details

Variant: esv2666825

Internal ID

9586244

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr17:36182836..36222478	hg38	UCSC Ensembl
Outer	chr17:36182465..36222948	hg38	UCSC Ensembl
Inner	chr17:34510216..34549922	hg19	UCSC Ensembl
Outer	chr17:34509845..34550392	hg19	UCSC Ensembl

Cytoband

17q12

Allele length

Assembly	Allele length
hg38	40484
hg19	40548

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv545e199

Supporting Variants

essv5439067, essv5891956, essv6336686, essv5900278, essv6426528, essv6454719, essv5601575, essv6128983, essv5959758, essv6154571, essv5406530, essv6100338, essv5743951, essv5553625, essv6401035, essv5819470, essv5424377, essv5785481, essv6410178, essv5488167, essv6290525, essv6188663, essv6142832, essv5988580, essv5832883, essv5602071, essv6564092, essv6188280, essv6105994, essv6499739, essv5786668, essv6119964, essv6461127, essv6068549, essv6295738, essv6213171, essv5692384, essv5957647, essv5929002, essv6113117, essv6009083, essv5492065, essv6581151, essv6351004, essv5410172, essv6564381, essv6592411, essv5480150, essv6310964, essv6501385, essv5869699, essv6201780, essv6492375, essv5623037, essv6547356, essv6412976, essv5516479, essv5957069, essv5552069, essv5989291, essv5894401, essv5576541, essv6030009, essv5827089, essv6158620, essv5812412, essv6034064, essv5434456, essv5867429, essv5589344, essv6200849, essv5904284, essv5600212, essv6543152, essv6101070, essv6457724, essv5922590, essv5919715, essv6504359, essv6225455, essv5447810, essv5880951, essv6430357, essv5590072, essv6363071, essv5397934, essv5682899, essv5488080, essv6220395, essv5475950, essv6585996, essv6183514, essv5850252, essv6268437, essv5778733, essv5473621, essv6121580, essv5452410, essv6503960, essv6547262, essv6311970, essv6568888, essv5781446, essv5670153, essv5638151, essv5854382, essv6241483, essv6435371, essv6482304, essv5884638, essv6014269, essv5569763, essv6593685, essv6352111, essv6193239, essv6562207, essv5421589, essv6222930, essv6001641, essv6021509, essv6340521, essv5621739, essv6352669, essv6098899, essv5538068, essv5681578, essv5475480, essv5408240, essv5816654, essv5533834, essv6082825, essv5804950, essv6591360, essv6299784, essv6383378, essv5574956, essv6591968, essv5883477, essv6454962, essv6159133, essv6406859, essv6322474, essv6126064, essv5975268, essv5909143, essv5485653, essv5564849, essv6540578, essv5826400, essv5487075, essv6019356, essv6450478, essv6374978, essv5805841, essv6441308, essv5848864, essv6411751, essv5605029

Samples

NA20588, NA12717, NA11830, NA12842, NA20543, NA20766, NA12286, NA20508, NA11995, NA11829, NA10851, NA12273, NA12414, NA20514, NA11933, NA11931, NA20816, NA20752, NA20532, NA20512, NA12045, NA12751, NA12004, NA12340, NA20808, NA20517, NA20507, NA12400, NA12750, NA12399, NA12155, NA07357, NA12413, NA12341, NA12813, NA20814, NA20537, NA07346, NA20796, NA20798, NA20589, NA20586, NA20774, NA20756, NA20795, NA12348, NA11992, NA07048, NA11918, NA07347, NA12283, NA20768, NA20540, NA12287, NA20513, NA20541, NA12761, NA11930, NA20759, NA20539, NA12282, NA20518, NA20819, NA20775, NA12156, NA06984, NA20812, NA11994, NA12889, NA20811, NA12828, NA20757, NA20533, NA20515, NA20753, NA12748, NA11993, NA20818, NA11831, NA10847, NA12777, NA20535, NA12489, NA20800, NA20787, NA12342, NA20505, NA12003, NA20809, NA20521, NA20810, NA20760, NA20536, NA20506, NA20519, NA20770, NA20525, NA11919, NA20581, NA12829, NA11894, NA20538, NA06989, NA12827, NA12144, NA20828, NA12778, NA20542, NA20534, NA20765, NA12043, NA20526, NA20799, NA20522, NA20801, NA12716, NA11881, NA12775, NA20815, NA12272, NA20804, NA20520, NA07051, NA20785, NA12046, NA20790, NA20530, NA20527, NA20792, NA20778, NA20544, NA20516, NA20803, NA20797, NA12763, NA12347, NA06986, NA20582, NA12749, NA20510, NA12830, NA20786, NA20807, NA11843, NA20826, NA20528, NA20503, NA20502, NA07056, NA11892, NA12006, NA07000, NA12154, NA20754, NA12776, NA11832, NA20772, NA20509

Known Genes

CCL3L1, CCL3L3, CCL4L1, CCL4L2

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2666825

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	158
Observed Complex	0
Frequency	n/a