A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2666456



Internal ID9585875
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:16201613..16201932hg38UCSC Ensembl
chr11:16223159..16223478hg19UCSC Ensembl
Cytoband11p15.1
Allele length
AssemblyAllele length
hg38320
hg19320
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5573630, essv6159081, essv5552521, essv5689472, essv5475377, essv6569603, essv5469438, essv6294674, essv5481677, essv6136361, essv5747500, essv6217634, essv6112120, essv6007980, essv5510736, essv5884899, essv5581303, essv5771880, essv5609856, essv5540885, essv6094577, essv6221511, essv6379914, essv6146543, essv5517502, essv5575198, essv5722993, essv6075868, essv5821661, essv5979568, essv6180085, essv6029012, essv5547966, essv6455678, essv5448166, essv6443520, essv6454194, essv6338900, essv6078443, essv6553804, essv6149213, essv6213625, essv5860189, essv5596580, essv6224338, essv5406567, essv5881966, essv6525633, essv6184449, essv6573687, essv5965529, essv5476182, essv6404513, essv6235603, essv5968139, essv5756782, essv5503585, essv5615557, essv5876663, essv6055037, essv5656247, essv6593926, essv5695784, essv5949137, essv6012363, essv5869043, essv6177412, essv6464345, essv5593918, essv5605839, essv6332359, essv5459773, essv5574370, essv6341205, essv5888714, essv6042025, essv6517942, essv6362653, essv5534971, essv6262170, essv6151974, essv6454243, essv6093068, essv6113609, essv6147721, essv5424601, essv5917117, essv6028978, essv5744301, essv5578240, essv6212877, essv6334940, essv6341132, essv6417757, essv6496417, essv5702643, essv5563993, essv5775440, essv5639531, essv5615036, essv5423563, essv5946885, essv5987334, essv6119728, essv5548150, essv5550302, essv6416757, essv5952025, essv5683568, essv5722811, essv5729701, essv5441960, essv6356418, essv6505433, essv5933180, essv5553777, essv6508290, essv5826130, essv5402809, essv6290181, essv6447355, essv6174022, essv6441872, essv6590216, essv6228637, essv5434346, essv6431797, essv6188611, essv5789002, essv5830643, essv6259129, essv6453068, essv5996129, essv5742089, essv5424172, essv5992872, essv5553859, essv6326912, essv5484503, essv5451843, essv5916215, essv5596011, essv5804081, essv6462369, essv6258503, essv6598006, essv5489884, essv5732973, essv6123933, essv6316432, essv5728588, essv5453967, essv6466357, essv5468684, essv5748873, essv6274004, essv5772623, essv5685232, essv5816451, essv6450231, essv6055760, essv6569703, essv5816399, essv5542508, essv6455104, essv6148092, essv6337724, essv6394070, essv5905321, essv5912843, essv6523961, essv5811310, essv5498394, essv6573768, essv6246421, essv6519902, essv5495882, essv6337318, essv5610466, essv5857431, essv6587190, essv5406249, essv5697750, essv5610396, essv5731217, essv6415287, essv6291472, essv5922834, essv6094695, essv5787601, essv5632130, essv5927300, essv6375579, essv5482694, essv6495541, essv6282648, essv5613901, essv6096347, essv5870612, essv6140712, essv6128075, essv6185323, essv6051672, essv5855391, essv6230016, essv6178631, essv6262315, essv6171340, essv6479845, essv5936222, essv5431422, essv5825742, essv5509929, essv6343692, essv5897818, essv5571298, essv5625309, essv6371751, essv6227721, essv5564465, essv5747153, essv6364780, essv6223201, essv5646305, essv5465116, essv5500363, essv6157645, essv5845204, essv6052453, essv6266357, essv6371630, essv5511971, essv6456080, essv6367238, essv6169061, essv5946002, essv5901483, essv6043104, essv6113967, essv6392517, essv6142365, essv6191016, essv6049055, essv5611249, essv6456877, essv6001649, essv5800601, essv5584529, essv5631949, essv6517796, essv5447104, essv5510769, essv5513625, essv5923746, essv6533211, essv6526883, essv6514987, essv5805131, essv5630085, essv6190437, essv5423254, essv6546480, essv6540989, essv6101391, essv5680802, essv6035004, essv5483518, essv6132985, essv6571474, essv5715374, essv6416711, essv5915158, essv5883409, essv6323469, essv5901881, essv6302738, essv6013756, essv6175799, essv5917074, essv5605591, essv6135755, essv6378844, essv6585205, essv6563519, essv6063625, essv6086705, essv6448264, essv5737579, essv5963336, essv6039854, essv6516801, essv6206506, essv5631458, essv5612690, essv6084712, essv6481447, essv6492886, essv5921600, essv6443276, essv5520228, essv5424408, essv6031804, essv6049006, essv5665336, essv6126122, essv6500706, essv5421586, essv6449512, essv5439702, essv6346243, essv5483489, essv6265083, essv5555673, essv5706983, essv6049753, essv5758389, essv5760064, essv5496796, essv5607446, essv5563725, essv5842486, essv5402405, essv6114908, essv5674986, essv5716200, essv6585159, essv6211972, essv6201619, essv6476624, essv6388485, essv5450908, essv5410055, essv5936714, essv6471944, essv6159279, essv6052717, essv6089741, essv5914521, essv5781019, essv5916190, essv6127811, essv6166155, essv5648335, essv6016480, essv6379838, essv6340060, essv6091978, essv6242833, essv6032428, essv6077031, essv5925395, essv5961720, essv6112543, essv6091479, essv5674703, essv6294477, essv5872228, essv5868426, essv6296614, essv6174645, essv6051853
SamplesHG00613, HG01441, NA19012, NA11881, NA18621, NA19207, NA18870, NA19248, NA12154, NA12489, HG00537, NA18605, NA07347, NA18520, NA18595, NA18616, NA18951, HG00619, NA18534, NA18530, NA18630, NA18871, HG00418, NA12286, NA19081, NA18523, NA19114, HG00705, HG00437, HG00500, NA11920, NA19209, NA12347, NA18501, NA19093, NA18526, NA19311, NA11918, NA19223, NA10847, NA18545, NA18603, NA19319, NA18516, NA18953, NA12828, NA18517, HG00428, NA18947, NA18489, NA19144, NA18546, NA18507, HG00334, HG00581, NA18963, NA07051, NA19257, NA18505, NA18557, NA12287, NA18943, NA18596, NA18949, NA18868, NA19077, NA19062, HG00556, NA11919, NA12763, NA19085, NA18967, NA18627, NA19076, NA19652, HG00421, HG00583, NA12004, NA12383, NA18566, HG00337, NA18635, NA18536, NA12155, NA18576, NA18622, NA18960, NA18563, NA19197, NA07357, NA18623, NA19107, NA18617, NA18990, NA18636, NA18856, NA19083, NA19088, HG00628, NA12273, NA07048, NA12761, NA18638, NA18956, NA19066, NA11933, NA18959, HG00533, NA18609, HG00419, NA18547, NA11831, NA12829, NA18976, NA11894, NA12400, NA18637, NA18973, NA19075, NA11995, NA18916, HG00637, NA18593, NA18982, NA19056, NA19663, HG01187, NA12830, NA12777, NA18634, NA19700, NA12144, HG00584, NA12751, NA19190, NA12006, NA19000, NA19213, NA19247, NA19080, NA19153, NA07346, NA12046, NA12716, NA18537, NA18620, NA19129, NA19172, NA19189, NA12892, NA18633, NA18572, NA19703, NA12778, HG00325, NA12348, NA18498, NA18486, NA18968, NA18986, NA19102, NA06986, NA12275, NA19005, NA18510, NA18502, NA19119, NA19657, NA19002, NA18558, NA18977, NA19098, NA18941, HG00501, HG00672, HG01170, HG01069, HG01356, NA18504, NA11892, NA18487, NA18564, NA18858, NA18942, NA18961, NA18613, HG00513, HG00524, NA19720, NA18988, HG00512, HG00534, NA19707, NA12283, NA18562, NA19074, NA19131, NA19159, NA18910, NA18579, NA18974, NA18985, HG00589, NA18945, NA18606, NA18543, NA18940, NA11832, NA19235, NA18619, NA18987, NA10851, NA12890, NA18582, NA18999, NA18597, NA18552, NA19138, NA19729, NA12272, NA18983, HG00443, NA18599, NA18907, NA18909, NA18567, NA19078, NA12749, NA06984, NA12413, NA18565, NA19009, HG00663, NA12156, NA12889, NA19116, NA18631, NA18560, HG00580, NA18544, NA18602, NA18577, NA19099, HG00654, NA18614, NA18548, NA11830, NA11992, NA12003, NA18944, NA19063, NA19225, NA18917, NA11993, NA12399, HG00656, NA12546, NA12842, NA19160, NA19655, NA18571, NA19732, HG00422, NA18924, HG00708, NA19198, NA18610, NA19070, NA12045, NA18984, HG00693, NA11932, NA18611, NA11829, NA19130, NA19171, NA12717, NA18532, NA18549, NA18853, NA19204, HG00442, HG00473, NA18981, NA19079, HG00626, NA06994, NA18615, NA19758, HG00476, HG00671, NA19087, NA18555, NA19200, NA19007, NA18519, NA19065, NA07000, NA12775, NA19058, HG00531, NA18980, NA18553, HG00327, NA19137, NA12827, NA18964, HG00313, NA19152, NA18861, HG00536, NA12750, NA11930, NA07037, HG01072, NA18561, NA18933, HG01055, NA18952, NA18975, NA07056, NA18874, NA18612, HG00449, NA19060, NA18550, NA18570, NA19003, NA19072, NA18511, NA06989, NA12340, NA18948, NA11931, NA12813, NA18972, NA19010, NA18573, NA18608, NA18542, NA19210, NA12776, NA19004, NA11893, NA19108, NA18965, NA19084, NA12341, NA12044, NA18873, NA19147, HG00479, NA18632, NA18559, NA18912, NA19383, NA12843, NA18624, NA18508, NA19054, NA19059
Known GenesSOX6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2666456
Frequency
Sample Size1151
Observed Gain0
Observed Loss361
Observed Complex0
Frequencyn/a


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