Variant Details

Variant: esv2665309

Internal ID

9931414

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:178526151..178526581	hg38	UCSC Ensembl
	chr1:178495286..178495716	hg19	UCSC Ensembl

Cytoband

1q25.2

Allele length

Assembly	Allele length
hg38	431
hg19	431

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv5866557, essv5856039, essv5644212, essv5665265, essv5811388, essv5744116, essv6132041, essv5396474, essv6402843, essv6056252, essv6354888, essv6285831, essv6263611, essv5652627, essv6452739, essv5553096, essv5607108, essv5910303, essv5721099, essv6496893, essv5812732, essv6320414, essv6310151, essv5482480, essv5405173, essv6487530, essv6165746, essv6189566, essv5700555, essv6130349, essv5841620, essv5726880, essv5524766, essv6184779, essv5924653, essv6479306, essv6088715, essv6453083, essv6223578, essv5768493, essv6536692, essv6165499, essv5986453, essv6204857, essv6555247, essv6115694, essv5743810, essv5840395, essv6420771, essv5568100, essv6361334, essv5865038, essv5770103, essv5441452, essv5401856, essv6069860, essv6481346, essv6396348, essv6326546, essv6185891, essv6283955, essv5498824, essv5930427, essv6467477, essv5609311, essv6378950, essv5713798, essv5437983, essv5917623, essv5905337, essv5715904, essv6363886, essv6345913, essv6077409, essv6583953, essv5497357, essv5668866, essv5553471, essv5753586, essv6582502, essv6181878, essv5668586, essv5631314, essv5605399, essv5783108, essv6413452, essv5992034, essv6579276, essv5844338, essv5787223, essv5642993, essv6224598, essv6149863, essv5799868, essv5771253, essv6486739, essv6273636, essv6291107, essv6270890, essv5707817, essv6359994, essv5488548, essv6535696, essv6559576, essv6192047, essv5532041, essv5979764, essv5590798, essv5469423, essv5710985, essv6314611, essv6163810, essv6085832, essv6140949, essv5686329, essv6015163, essv5407102, essv5815873, essv6489365, essv5904121, essv5396586, essv6189023, essv6128095, essv6466810, essv5929117, essv5804323, essv5785393, essv5966669, essv5397598, essv5765462, essv5526611, essv5618370, essv6498979, essv6478747, essv5978822, essv6118236, essv5534582, essv6269708, essv5603614, essv6175459, essv5587375, essv5421134, essv5598355, essv5491989, essv6232991, essv5685052, essv6503580, essv5977366, essv5415468, essv6449921, essv5603219, essv5814104, essv6096541, essv5791656, essv6212152, essv5781585, essv5484736, essv5695991, essv6408636, essv6460912, essv6305957, essv6028123, essv6396147, essv5550175, essv5738146, essv6186237, essv6546177, essv5553068, essv6487068, essv5924584, essv5997374, essv6514687, essv6344919, essv6327673, essv5432408, essv5743584, essv6252165, essv5898815, essv6503040, essv6089346, essv6320630, essv6221173, essv6429430, essv6261638, essv6069963, essv5416252, essv6439796, essv6275698, essv6524369, essv6564129, essv6004090, essv5736653

Samples

HG00403, HG01060, HG00650, HG00442, NA19700, HG00592, NA19703, NA19055, HG00536, NA19397, HG00608, HG00671, HG01359, HG00559, HG00524, HG01079, NA19704, HG01374, HG00315, NA18999, NA18603, HG00640, HG00244, NA19359, HG00699, NA18545, NA19819, NA18596, NA18530, NA12058, NA18606, NA20507, HG00654, NA12400, NA18633, HG00261, NA18602, HG00693, NA18627, HG00337, HG00663, HG01350, HG01366, HG01070, HG00589, HG00251, HG00501, NA19382, NA18597, HG01351, NA18595, HG00702, HG00689, HG00448, NA18567, HG00330, HG01492, HG00634, NA18574, HG00346, NA19313, HG00247, HG00537, NA19130, NA18611, HG01134, HG00512, HG00139, HG00277, HG00683, HG00325, HG00232, NA19372, NA11994, HG00534, HG00422, HG01440, HG00309, HG00427, HG00160, HG00338, HG00159, NA18557, HG01048, HG01133, NA19445, HG00323, HG00530, HG00419, HG00253, NA18638, HG00464, HG00108, NA18614, HG01353, HG00543, HG00313, HG00154, NA18544, HG00560, NA18613, HG00731, HG00629, NA19657, HG00443, HG00268, HG00176, HG01187, HG00596, HG00557, HG00245, HG00428, HG00577, HG00701, HG00657, NA19391, NA19663, HG00436, HG00584, HG00533, HG00583, NA18637, HG00500, HG00275, HG00619, HG00635, NA18548, HG00740, HG00284, HG00273, HG00404, HG00531, HG00479, HG00525, NA19009, HG00276, HG00704, NA19682, NA18523, NA19625, HG01107, NA19436, NA19003, HG00611, NA18632, HG00476, HG00124, HG00254, HG00285, HG00625, NA19712, HG00565, HG00580, HG00375, NA18941, NA07051, HG01375, HG00473, HG00319, HG00256, HG00418, NA18610, HG00620, HG00125, NA19818, NA19398, HG00707, HG00672, HG00614, HG00513, HG00578, HG00259, HG00656, NA19468, HG01055, HG00123, NA18636, HG00310, HG00280, NA19213, HG00343, HG00372, HG00595, HG00472, NA18989, NA18623, NA18612, HG01437, HG00553, HG00437, HG00581, NA18620

Known Genes

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2665309

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	192
Observed Complex	0
Frequency	n/a