A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2663727



Internal ID9929832
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:38961311..38992917hg38UCSC Ensembl
Outerchr22:38960940..38993337hg38UCSC Ensembl
Innerchr22:39357316..39388922hg19UCSC Ensembl
Outerchr22:39356945..39389342hg19UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg3832398
hg1932398
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv833e199
Supporting Variantsessv6438892, essv6016371, essv5524154, essv5606931, essv6021857, essv5895341, essv6191907, essv6005399, essv6265431, essv5990289, essv5459655, essv5944863, essv6277368, essv5936955, essv5616429, essv6423493, essv5883104, essv5662410, essv6538799, essv6263693, essv5434940, essv6134985, essv6366384, essv6169396, essv6340469, essv5680287, essv5748211, essv6445299, essv6093010, essv5837652, essv5901707, essv5821245, essv5536822, essv6017514, essv5396273, essv5981144, essv6407035, essv6373360, essv5843935, essv6586867, essv6378806, essv5432084, essv5981121, essv5757159, essv5905909, essv5634298, essv5612542, essv5933064, essv6368279, essv6204218, essv6151268, essv5807443
SamplesHG01441, HG01462, NA18561, HG01389, HG01374, NA18603, NA18545, HG01456, NA18526, NA18602, NA18627, HG01366, NA18595, HG01492, NA18618, NA18571, NA18611, HG01134, HG01455, NA18560, HG01440, NA18614, NA18544, NA18605, NA18613, HG01360, NA18579, NA18572, NA18537, HG01390, NA18566, NA18532, NA18634, NA18608, NA18632, NA18542, NA18535, NA18543, NA18559, NA18628, HG01375, HG01137, NA18631, HG01254, NA18636, HG01251, HG01377, NA18624, NA18623, NA18622, NA18562, NA18620
Known GenesAPOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2663727
Frequency
Sample Size1151
Observed Gain0
Observed Loss52
Observed Complex0
Frequencyn/a


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