A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2663675



Internal ID9929780
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:90858667..90859186hg38UCSC Ensembl
chr15:91401897..91402416hg19UCSC Ensembl
Cytoband15q26.1
Allele length
AssemblyAllele length
hg38520
hg19520
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6527822, essv5408256, essv5556962, essv6040135, essv6423226, essv5936075, essv5931794, essv6553582, essv5661516, essv6516504, essv6039924, essv5670819, essv5828109, essv5864877, essv5470818, essv6113129, essv6408256, essv5873445, essv5634038, essv5647446, essv5843344, essv6359947, essv5406384, essv5915922, essv6048920, essv5685725, essv5977267, essv5997048, essv6028522, essv6473944, essv6459047, essv5656861, essv6457674, essv5518333, essv6019428, essv5686653, essv6068645, essv6006005, essv5521663, essv5437405, essv5644466, essv6553006, essv5395593, essv6440839, essv5959768, essv5510395, essv5973439, essv5875124, essv5626645, essv6352709, essv6212248, essv6290531, essv6100856, essv6423517, essv6239446, essv6558002, essv5853642, essv6317246, essv6039283, essv6023616, essv5834474, essv5673525, essv5486283, essv5892073, essv6226686, essv6001075, essv6466915, essv6298524, essv5818767, essv6428937, essv5917783, essv6133600, essv5931647, essv5455784, essv5875806, essv6058535, essv6375455, essv6147235, essv6421819, essv5588522, essv6216055, essv6140471, essv6104141, essv5872895, essv5876122, essv5508247, essv5948135, essv6127311, essv6448528, essv5957558, essv6479263, essv5780042, essv6546282, essv5985052, essv5865039, essv5465552, essv6253259, essv6359364, essv6325760, essv5983705, essv6147556, essv5439514, essv6546777, essv6173712, essv6378222, essv5576579, essv5665176, essv5490103, essv6576289, essv5918290, essv5653700, essv6190687, essv5582729, essv5497170, essv6411260, essv6305303, essv5967329, essv5933789, essv5681144, essv6571119, essv6476165, essv6448304, essv5736056, essv6160285, essv5681231, essv6131415, essv5941143, essv6486221, essv5422301, essv6446297, essv5992314, essv6421958, essv6405478, essv6132083, essv5973885, essv5488143, essv6173421, essv5851506, essv5489023, essv6564933, essv6435355, essv6404450, essv6429477, essv5996836, essv6539906, essv6449138, essv6344113, essv5620316, essv6315591, essv5590890, essv5909172, essv5929777, essv5626619, essv5488797, essv6108565, essv5563519, essv5655444, essv5950788, essv5840558, essv6481239, essv5739809, essv5657687, essv5580555, essv5540084, essv5442853, essv5463896, essv6201335, essv5953702, essv5827596, essv5817916, essv6433999, essv6596018, essv6182849, essv5817751, essv5588250, essv5479155, essv6580002, essv6007296, essv5824271, essv5913546, essv6240003, essv6590254, essv5916563, essv6453331, essv6381698, essv6229210, essv5856713, essv6166429, essv5665189, essv5998512, essv6093611, essv6554173, essv6421224, essv5815461, essv6256084, essv5887042, essv5628643, essv6425400, essv5401393, essv6580992, essv5786488, essv6155743, essv5724348, essv6494305, essv5697207, essv6547641, essv6435734, essv5990074, essv5922301, essv5748704, essv5856447, essv5609447, essv5765638, essv6027416, essv5828996, essv5924423, essv6548506, essv6000985, essv5809890, essv5628878, essv6084455, essv5756522, essv5626733, essv6195387, essv6522745, essv6181311, essv5818033, essv5456265, essv6244853, essv5795710, essv5601137, essv6028092, essv5555340, essv6361511, essv6557048, essv5656165, essv5901014, essv5634267, essv5916851, essv5776624, essv5589201, essv5585589, essv5564314, essv6050297, essv6039823, essv5638814, essv5900977, essv5869585, essv5516141, essv6515810, essv6021302, essv5920644, essv5504483, essv5401051, essv5865183, essv6316618, essv5970470, essv5621735, essv6451917, essv5765865, essv6472702, essv5498498, essv6117611, essv5826967, essv6575353, essv6042392, essv5846502, essv6205881, essv5399493, essv6456876, essv6526094, essv5560408, essv6486340, essv6133746, essv6120783, essv6570485, essv6521937, essv6047159, essv5770272, essv5993530, essv5606806, essv6356101, essv5606927, essv5738571, essv5487393, essv6569082, essv6584405, essv5853260, essv5994165, essv5939328, essv6207322, essv6026219, essv5884420, essv6054397, essv6365189, essv6308402, essv6547929, essv6392096, essv6360976, essv6316389, essv6002243, essv6513304, essv6350766, essv6473475, essv6321631, essv6587723, essv5423574, essv5793519, essv6514595, essv6027823, essv5759241, essv5473224, essv6307583, essv6000607, essv5603934, essv5794442, essv6163629, essv5661896, essv5981907, essv6463580, essv6050045, essv5426311, essv6196691, essv6466688, essv6050437, essv5674456, essv5608942, essv5860754, essv5431812, essv6066787, essv5603191, essv6334746, essv6088058, essv5850127, essv6176298, essv6264989, essv5824286, essv6278926, essv5688688, essv6308669, essv6546861, essv5789647, essv6005069, essv6274991, essv6307017, essv5718249, essv5576558, essv5956463, essv5582739, essv5854115, essv5725603, essv6144938, essv5714238, essv6205150, essv5618099, essv6078403, essv5802765, essv5862968, essv5642947, essv6012019, essv6090613, essv6178730, essv6584199, essv5911607, essv5852101, essv6435718, essv5793980, essv6145701, essv5991242, essv6030403, essv5962428, essv6394941, essv6556596, essv6252032, essv6159534, essv5667370, essv6130218, essv6382404, essv6294079, essv5824051, essv5995262, essv6490025, essv6043189, essv5931302, essv5854654, essv6428252, essv6521732, essv6337037, essv6242268, essv5564013, essv6284874, essv5939992, essv5569482, essv6231870, essv6210919, essv5597923, essv6597528, essv6495067, essv6151471, essv6322659, essv5464482, essv6181709, essv6086897, essv6220803, essv5881618, essv5509268, essv6005233, essv6149547, essv6462405, essv5421571, essv5671037, essv5807069, essv6276360, essv6592766, essv6178257, essv6122996, essv5702463, essv5687596, essv6248817, essv5810746, essv5957925, essv5783936, essv5611142, essv6059139, essv5752657, essv6505745, essv5844037, essv6071217, essv6519292, essv6389371, essv6176393, essv5986007, essv5506707, essv6435490, essv5937312, essv5945264, essv6183667, essv6100144, essv5951021, essv5893542, essv5954241, essv5877067, essv5757841, essv6087265, essv6130846, essv6315890, essv6139985, essv5804424, essv5446732, essv5630639, essv5512506, essv6014751, essv6457860, essv6047353, essv6458026, essv5459479, essv5852339, essv6069431, essv6108793, essv6453881, essv6585536, essv5748329, essv6134118, essv5783658, essv5861080, essv6166731, essv6176788, essv6070995, essv6530687, essv5807911, essv5701483, essv6112229, essv5728185, essv5853203, essv5750219, essv5568984, essv5966582, essv6340270, essv6352551, essv6421861, essv5602928, essv6116149, essv5622770, essv5797805, essv6001243, essv6008819, essv5587241, essv6489780, essv5598036, essv6106310, essv5775627, essv5566698, essv5863732
SamplesNA18502, HG00442, NA20529, HG00142, NA19664, NA19399, HG00257, HG00151, HG00233, NA18504, NA19377, NA18530, NA19920, HG00337, NA19446, NA19171, HG01350, NA19379, NA19315, NA20589, NA19678, HG01492, NA18916, NA07048, HG01083, HG01365, NA19384, HG00537, HG00243, NA20291, HG00158, HG00512, HG00281, HG00139, NA20759, NA18868, NA19172, NA18867, HG01550, NA20515, NA20755, NA19921, HG00137, NA20535, HG00731, HG01095, NA20810, NA19663, NA12718, NA18907, NA18537, HG01047, HG01102, HG00331, NA19453, NA18532, NA06989, NA19452, NA19682, NA18523, NA19318, NA12778, NA19395, NA19625, HG01107, NA19440, HG00336, NA19256, NA18517, NA19712, NA19434, HG00580, NA19444, NA19331, NA19470, NA19428, HG00116, NA20281, NA19360, NA12763, NA12347, NA19328, NA19785, NA19223, HG00267, NA19102, NA18873, HG00274, NA20503, NA19129, HG00628, NA19065, NA18612, NA19429, NA19074, NA18487, HG01437, NA19431, NA18577, HG01060, HG01441, NA19700, NA19055, NA19397, NA18924, NA19466, HG01359, HG01052, NA18980, HG00100, NA18561, NA19704, NA18507, HG01188, NA11933, NA18599, HG01389, HG01374, NA20813, NA12045, NA19819, NA12004, NA12058, NA20808, NA20346, HG00150, NA20507, NA19190, NA18526, NA12400, HG01250, NA19660, NA19076, NA18489, HG00702, NA19723, NA18635, NA19916, HG00330, NA19131, HG00736, HG00610, NA19197, HG01354, NA19313, NA18498, NA20336, HG00590, HG01134, HG00277, HG00106, HG01170, HG00236, NA19719, NA20340, NA19371, NA19471, NA19087, NA12889, HG00182, NA19725, NA19189, NA18520, HG00338, NA19209, HG00178, NA18908, NA19451, HG00108, HG01136, HG00188, HG00149, HG00560, NA19247, NA19657, HG01360, NA19707, NA19462, NA19347, NA19391, NA19327, NA19982, NA18910, NA20344, HG01094, NA19655, HG01197, NA18499, HG01383, NA18853, NA20282, NA19225, NA20828, NA19160, NA18536, NA20542, NA20296, NA19401, HG00476, NA18535, NA11881, NA19108, NA18543, NA12775, HG00375, HG00136, HG00638, NA19786, HG00319, HG01108, HG00256, HG00125, NA20341, NA19818, NA19376, HG00707, HG00672, NA19248, NA19438, NA20582, NA19472, NA18987, NA19713, HG00174, NA19726, HG00372, HG00252, HG01377, HG00472, NA07056, NA18505, NA19004, HG00345, NA19153, NA19394, NA19701, NA20761, HG01173, NA19703, HG01462, NA19909, NA12286, NA19204, NA18861, NA18508, NA10851, NA12273, HG01066, HG00315, NA20802, HG00244, NA19350, NA19359, NA20294, NA19355, NA20332, NA18959, HG00737, HG00449, HG00654, NA19443, NA20356, NA18510, NA19107, NA07346, NA18563, HG00641, NA19373, NA18519, NA19319, HG01168, NA18923, NA18567, NA19457, HG00334, NA20287, NA19904, NA19130, HG01080, NA20518, HG00148, HG00325, NA11932, NA19372, NA11994, NA19235, NA19207, HG00160, HG01048, HG01133, NA20342, NA20127, HG01124, HG00154, NA19908, HG00282, NA19670, NA19403, HG00557, HG00245, NA18933, HG00732, NA19455, HG00263, HG00275, NA18579, NA18871, HG00284, NA19461, NA11919, HG00651, HG00250, NA20581, NA18912, HG01101, HG00140, NA18553, NA19099, HG00152, NA18963, NA12144, NA19469, HG00246, NA18858, HG01075, HG01148, NA19375, HG00258, HG00254, NA19390, HG00265, NA19147, NA20276, NA12272, NA20530, NA19835, HG00237, NA19324, NA19311, NA19783, HG00418, HG00339, NA18501, HG00259, HG00342, NA19468, NA19474, NA19093, NA20510, NA20289, HG00280, NA11843, NA19116, NA19780, NA19711, NA19900, NA19430, NA11892, HG01111, NA19316, NA19312, HG01125, NA19463, NA19063, NA12154, NA20754, NA19346, HG00553, NA19676, NA18620, HG01516, HG00249, NA11829, HG00524, NA19914, HG00187, NA19332, NA20531, NA18917, HG00367, NA18486, HG01465, HG00103, NA19393, NA19777, NA19057, NA18606, NA18870, HG01140, NA19374, NA19396, NA19381, HG01070, HG00501, NA19382, NA19448, HG01488, NA18982, NA19198, NA20317, HG00346, NA12283, NA19771, NA19138, HG00369, NA19404, NA19383, NA18874, NA19917, NA19137, HG01072, NA19731, NA19385, NA19317, HG01440, NA20811, NA19901, HG00159, NA19456, NA19445, NA19200, HG00260, NA11831, NA10847, HG01353, HG00133, HG01183, NA19437, HG01187, NA18934, HG00328, NA19152, HG00190, HG00701, NA19236, NA18516, HG00436, HG00320, NA20126, HG01073, HG00273, NA19114, NA20299, NA19774, NA19449, NA18856, NA12249, HG00117, HG00157, NA19338, NA19257, HG00276, NA19675, HG01204, NA19436, HG00124, NA18909, HG00285, NA19321, HG00366, NA19473, HG00357, NA19435, HG00278, NA19773, NA19380, NA19144, HG00308, NA19334, NA19439, NA19467, NA20797, NA07037, NA06986, NA19398, NA20348, HG01491, HG00656, NA20334, HG01055, HG00131, NA19213, HG01251, NA19661, HG01378, NA18488, HG01082, NA18511, NA07000, NA18522, HG00554, HG00180, NA18622
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2663675
Frequency
Sample Size1151
Observed Gain0
Observed Loss493
Observed Complex0
Frequencyn/a


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