A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2663582



Internal ID9929687
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:109212581..109212703hg38UCSC Ensembl
chrX:108455810..108455932hg19UCSC Ensembl
CytobandXq22.3
Allele length
AssemblyAllele length
hg38123
hg19123
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5582808, essv5545130, essv6013265, essv6307466, essv5848059, essv5526303, essv5938682, essv5640335, essv5670200, essv6515113, essv5405907, essv6239279, essv5605978, essv6575445, essv6478011, essv6428788, essv6240796, essv6001904, essv5552561, essv5934710, essv6310861, essv6140375, essv5884046, essv6524752, essv6462103, essv6117202, essv6010546, essv5760643, essv5529202, essv6360893, essv5677135, essv6241618, essv6480975, essv6216285, essv5917756, essv6118866, essv6462516, essv5753325, essv5473859, essv5445828, essv6272371, essv6182969, essv6389747, essv6090158, essv6558029, essv5874675, essv5790325, essv6407922, essv5799893, essv6450892, essv5490890, essv6439812, essv6426089, essv5940853, essv5628622, essv5457380, essv5627867, essv5600305, essv5954623, essv5692823, essv5629859, essv6006335, essv6497183, essv6085877, essv5528762, essv5438139, essv6328278, essv6052996, essv5804607, essv6467534, essv5691183, essv5625325, essv6300351, essv5643262, essv6310075, essv6046911, essv6561472, essv6440895, essv5953648, essv5760012, essv5854240, essv6536336, essv6317358, essv6000805, essv5736185, essv5619598, essv6350107, essv5559478, essv6554981, essv5430440, essv5483386, essv5800569, essv6367534, essv5993028, essv6571880, essv5923850, essv6571228, essv5538786, essv5537547, essv6105952, essv5905418, essv5418887, essv5659883, essv6568578, essv5906317, essv6011447, essv5747987, essv6035368, essv5946116, essv5587840, essv5905364, essv5573645, essv5450805, essv5457963, essv6474126, essv6411037, essv6268469, essv5488502, essv5877052, essv6465050, essv6236762, essv5667503, essv6570569, essv6321721, essv5713249, essv6027055, essv6594570, essv5396878, essv6459594, essv6335585, essv6044706, essv5904400, essv5805009, essv6192738, essv6092781, essv5679790, essv5728433, essv5399869, essv5433418, essv6198612, essv5467006, essv6429698, essv5446595, essv6439354, essv6424924, essv5565105, essv5417928, essv6146140, essv6101224, essv6137552, essv5837809, essv5803730, essv6334103, essv6372756, essv6294757, essv6159247, essv6558004, essv5970270, essv6285378, essv6390765, essv5827832, essv5787174, essv5507645, essv5824644, essv5664349, essv5906776, essv5414459, essv6118786, essv5792432, essv6245112, essv6420363, essv6278226, essv6256545, essv6306077, essv6096898, essv6333191, essv5476432, essv6302018, essv5931830, essv6486865, essv5815068, essv6407118, essv6229995, essv6592845, essv6381705, essv6476926, essv6487623, essv5644665, essv5867363, essv5447739, essv6111436, essv5740554, essv5890837, essv6363281, essv5556287, essv5870751, essv6564265, essv6285373, essv6541433, essv5880413, essv5684486, essv5704112, essv6309025, essv6249967, essv6226073, essv6141679, essv6448644, essv6518100, essv6266483, essv6219043, essv5667111, essv6431839, essv5648899, essv6245832, essv5472986, essv6398720, essv6517288, essv5492158, essv5641805, essv5634117, essv5522874, essv5867102, essv5793731, essv5445033, essv6046419, essv6352286, essv5661644, essv5832556, essv5740154, essv5704599, essv6134921, essv6369446, essv5863099, essv5742392, essv5621579, essv5716744, essv5851285, essv6475693, essv5444071, essv5878233, essv6320328, essv6192019, essv6199787, essv5772148, essv5865633, essv6345521, essv5760212, essv6083492, essv5427153, essv6563638, essv6247322, essv5694898, essv5428042
SamplesNA19701, HG00650, HG00442, NA19058, HG01462, NA18621, NA18947, NA19066, NA18565, HG00257, HG00233, NA18530, HG00449, HG00654, HG00261, HG00693, HG00663, NA18563, NA18519, HG00589, HG00272, NA18597, HG01351, HG01168, NA18567, NA18558, NA18960, NA18618, NA07347, NA18571, HG01083, NA20287, HG00537, HG00243, NA19079, HG00158, HG01080, HG00232, HG00534, NA19722, NA18990, HG01550, HG00253, NA19789, NA18539, HG01124, NA18951, NA18605, NA20800, NA18538, HG00282, NA19070, NA19056, NA19670, HG00557, HG00245, HG00732, HG00657, NA20314, NA19663, HG00556, HG00344, HG01498, HG00275, NA12718, NA18534, HG00551, HG00692, NA19064, NA18573, HG00250, NA19084, HG00690, HG00479, HG00684, NA18553, NA19059, HG00146, NA18523, HG00126, NA18541, HG01075, NA19012, NA18953, NA19003, NA20799, NA19729, HG00611, NA18533, NA18517, NA18564, NA18628, NA20815, NA19072, HG00734, NA19010, HG01174, HG00473, NA19083, HG00662, HG00418, NA18615, NA18610, HG01489, HG01342, HG00620, HG00339, HG00513, NA18631, NA19779, NA19716, HG00267, NA18609, HG00310, NA20786, NA20826, NA19780, NA18983, HG00595, HG00147, NA18989, HG01125, NA18624, NA18623, NA19063, NA12154, NA19065, NA18612, HG01437, HG00581, NA18577, NA18620, HG00593, HG00626, HG00536, HG00231, HG00249, HG01052, HG00187, NA18980, NA20531, HG01374, HG00306, HG01465, HG00699, HG00103, NA19777, NA19057, NA18596, HG00566, HG01140, NA19746, HG00127, NA19660, NA19076, NA19005, NA18550, HG00501, NA18595, HG00702, HG00448, NA18635, NA18619, HG00736, HG00610, NA19054, HG00270, NA18964, NA18611, HG00277, NA19651, HG00683, HG00106, HG00236, NA18977, NA19719, NA19731, NA18617, HG00422, HG01176, NA18986, NA19087, HG01440, NA18973, HG00419, NA18638, HG00464, HG00260, HG00543, NA18544, NA19657, HG00176, HG00596, NA20524, HG00428, NA20809, HG00653, HG00577, NA18956, HG00701, NA18991, HG00475, HG00584, NA18637, HG00500, NA19788, NA18630, HG00619, NA19776, HG00708, HG00635, NA18566, NA19774, NA19655, HG01197, HG00613, HG00525, NA18634, NA18546, NA19685, HG00476, HG00124, HG00119, NA18535, NA18961, NA18952, NA18543, NA18559, HG00565, NA18950, NA18941, HG01494, HG00607, NA19786, NA19085, HG00672, HG00111, HG01491, NA19060, HG00421, NA18987, HG01254, HG00123, HG00698, HG01377, NA18984, HG01378, NA19755, HG00345, NA18549, HG01191, NA18622, HG00437
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2663582
Frequency
Sample Size1151
Observed Gain0
Observed Loss253
Observed Complex0
Frequencyn/a


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