A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2663133



Internal ID9929238
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32662339..32680245hg38UCSC Ensembl
Outerchr6:32661968..32680615hg38UCSC Ensembl
Innerchr6:32630116..32648022hg19UCSC Ensembl
Outerchr6:32629745..32648392hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3818648
hg1918648
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1112e199
Supporting Variantsessv6246900, essv6272485, essv5865192, essv6032746, essv6510142, essv5836903, essv5789994, essv5460974, essv6525909, essv6037900, essv6186461, essv6353014, essv6475616, essv5743695, essv5620647, essv5830781, essv6354823, essv5622203, essv6028387, essv6524750, essv5737778, essv5517917, essv6090996, essv6471773, essv6494368, essv6016908, essv5631878, essv6273114, essv5976002, essv6030988, essv5592561, essv6421055, essv5476487, essv6319338, essv6461047, essv6167335, essv6179900, essv6228816, essv6016959, essv5991897, essv6061247, essv5971817, essv6061740, essv5447224, essv5966515, essv6190569
SamplesNA20766, NA20508, NA20514, NA20816, NA20813, NA20532, NA20512, NA20805, NA20808, NA20517, NA20814, NA20537, NA20774, NA20768, NA20540, NA20513, NA20759, NA20819, NA20812, NA20811, NA20757, NA20753, NA20818, NA20787, NA20524, NA20505, NA20521, NA20760, NA20536, NA20519, NA20770, NA20581, NA20538, NA20828, NA20765, NA20526, NA20522, NA20804, NA20785, NA20790, NA20544, NA20797, NA20786, NA20528, NA20772, NA20509
Known GenesHLA-DQB1
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2663133
Frequency
Sample Size1151
Observed Gain0
Observed Loss46
Observed Complex0
Frequencyn/a


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