Variant Details

Variant: esv2663013

Internal ID

9929118

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr15:55363339..55364863	hg38	UCSC Ensembl
	chr15:55655537..55657061	hg19	UCSC Ensembl

Cytoband

15q21.3

Allele length

Assembly	Allele length
hg38	1525
hg19	1525

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6176150, essv6152568, essv6194462, essv6583892, essv6392221, essv5421859, essv6026715, essv5602498, essv5843546, essv5934994, essv6051198, essv6169017, essv6533928, essv5905127, essv5755993, essv6115022, essv5695072, essv5537658, essv6475690, essv5695250, essv6144023, essv6285707, essv6063580, essv6375864, essv5530397, essv6506170, essv6093363, essv5717045, essv6449877, essv6186525, essv6020107, essv5880141, essv5490333, essv6186624, essv6030292, essv6311447, essv5536359, essv5996193, essv6531354, essv5811070, essv5733532, essv6481406, essv6024046, essv5465822, essv6355754, essv6058461, essv5740640, essv5502584, essv6147924, essv5493002, essv5840549, essv5831064, essv6376549, essv6491796, essv6435520, essv6534728, essv6518357, essv5626510, essv5443355, essv5833825, essv5789075, essv6483239, essv6004403, essv5610014, essv6379464, essv6284822, essv6150071, essv5923225, essv6348058, essv5742155, essv6572646, essv6329928, essv5427166, essv6325618, essv5632077, essv6193567, essv5731624, essv5878889, essv6456523, essv5921421, essv5418083, essv6531141, essv5796392, essv5880589, essv5698946, essv5553353, essv6111104, essv5668101, essv6518643, essv6477581, essv5930456, essv5722698, essv6099232, essv6065499, essv5442607, essv5973935, essv5590908, essv6140213, essv5779085, essv5877415, essv5649614, essv5611849, essv5663267, essv6195831, essv5985962, essv6101819, essv5509714, essv5778297, essv5893135, essv6293580, essv6252690, essv6322216, essv6123223, essv6510606, essv5433809, essv6451600, essv6596386, essv5690944, essv5513799, essv6311999, essv5697900, essv6341619, essv5668977

Samples

NA12383, NA12717, NA19066, HG01359, NA12414, NA18561, NA12843, NA20532, NA19057, NA18596, NA18959, NA18606, NA20808, NA18616, HG00150, NA12400, NA20771, HG00663, NA20814, NA19076, NA18550, NA18595, HG00689, HG00173, HG01168, NA19723, NA18567, NA18619, HG00634, NA18960, NA18942, NA07347, HG01083, HG00247, NA18964, HG00311, NA19079, NA18949, HG00590, HG01134, NA12005, HG00683, HG00148, NA18977, NA12044, NA18986, NA19002, NA19445, HG00178, NA20757, NA20533, HG00419, NA19007, HG00188, NA18544, NA19657, NA19070, NA19403, NA19077, NA20809, HG00653, HG00701, NA20810, NA20760, HG00584, NA19081, NA18534, HG00708, NA19064, NA18548, HG01390, NA18566, NA19084, NA18626, HG00404, HG00479, NA11893, NA19453, HG00525, NA18553, HG00146, NA18963, NA18536, NA19625, HG01075, NA19012, NA18632, NA18543, HG00565, NA19072, HG00375, HG00278, HG01137, NA19083, NA19783, NA19085, NA18610, HG01342, HG00620, HG00614, HG00513, HG00578, NA18631, NA19060, HG00421, HG00123, NA18636, HG00112, HG00698, NA18983, HG00274, NA18984, NA11892, NA19004, HG00628, NA19063, NA19065, NA18549, NA20754, HG01437, HG00553, HG00581, NA18577

Known Genes

CCPG1, DYX1C1-CCPG1

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2663013

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	123
Observed Complex	0
Frequency	n/a