A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2662901



Internal ID9929006
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:39824798..39839004hg38UCSC Ensembl
Outerchr9:39824427..39839374hg38UCSC Ensembl
Innerchr9:41969816..41984022hg19UCSC Ensembl
Outerchr9:41969445..41984392hg19UCSC Ensembl
Cytoband9p12
Allele length
AssemblyAllele length
hg3814948
hg1914948
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1338e199
Supporting Variantsessv5639868, essv5860144, essv5872149, essv6031868, essv5612728, essv6543106, essv5449695, essv5753001, essv6107933, essv5957181, essv6364401, essv6063168, essv5703873, essv5790950, essv6590993, essv5988551, essv6320335, essv5444454, essv6232013, essv5827171, essv6025464, essv5850188, essv6279252, essv5506864, essv5449916, essv5934380, essv5575102, essv6233111, essv6111399, essv6087840, essv6184102, essv5890582, essv6312597, essv5726424, essv5410699, essv6544167, essv6506286, essv5585719, essv6334133, essv5684252, essv5478056, essv5775853, essv5581466, essv6401300, essv5932591, essv6246492, essv6132647, essv6014507, essv6480180, essv5659798, essv6251613, essv6111518, essv5670831, essv5708535, essv5799967, essv6271563, essv5654371, essv5432420, essv5545044, essv6532683, essv6447288, essv5564033, essv6574596, essv6587790, essv6050163, essv6377597, essv6169449, essv5994984, essv5778792, essv6005297, essv5599616, essv5798288, essv5970972, essv6588013, essv6077452, essv6395827, essv5923820, essv5462258, essv6496372, essv6478153, essv5492882, essv6191797, essv5522214, essv6290322, essv5417673, essv5986012, essv5423758, essv6494338, essv5723894, essv5934915, essv6174654, essv5670624, essv6548201, essv6104114, essv5805912, essv6056432, essv5443625, essv5574512, essv6590912, essv6073659, essv5882966, essv5907992, essv5730565, essv5520636, essv5590025, essv5617258, essv5570182, essv6059670, essv5984130, essv5961222, essv6509396, essv6164186, essv6361132, essv6419538, essv6529679, essv6082901, essv6131357, essv6087266, essv6080448, essv5556526, essv5954831, essv5513411, essv5493872, essv6009109, essv5987824, essv5882590, essv6533536, essv6589037, essv6114477, essv6352823, essv5769728, essv6293919, essv5613057, essv6092046, essv5418550, essv6413258, essv6409019, essv5898944, essv5642425, essv5486042, essv6064578, essv5791641, essv5791119, essv5953817, essv5540268, essv5857273, essv6515876, essv6201820, essv5509216, essv6512920, essv5861468, essv6360660, essv5496945, essv6005072, essv5693236, essv6150383, essv6102100, essv5735201, essv6106384, essv6538113, essv6382418, essv5865914, essv6051781, essv5782570, essv6597172, essv6247985, essv5854871, essv5653742, essv5904595, essv6145994, essv6443643, essv5515747, essv6266058, essv5896455, essv5813011, essv6039934, essv6453296, essv6544480, essv5594850, essv5939718, essv5627385, essv5989057, essv6296165, essv6437230, essv5690656, essv5638559, essv5410488, essv6102353, essv5671504, essv5584205, essv6124688, essv6426154, essv6304583, essv5760198, essv6223775, essv6164328, essv5531500, essv6164246, essv5596275, essv6556780, essv6435964, essv6103744, essv6255861, essv6569318, essv6533880, essv5863536, essv5573821, essv6236300, essv5890945, essv6295671, essv6296830, essv6159043, essv5450775, essv5553974, essv5637024, essv5716978, essv5954032, essv5476024, essv5697551, essv5660104, essv6403207, essv5441571, essv6394496, essv6399346, essv6203865, essv5772504, essv6456269, essv5840616, essv6223036, essv6146648, essv5751482, essv6373470, essv5540676, essv6148516, essv6136290, essv6099642, essv5845965, essv5812911, essv6251645, essv5583680, essv6103888, essv5876574, essv5616170, essv6344187, essv6416618, essv5711022, essv5410917, essv6147194, essv6040118, essv5999016, essv6131396, essv6454894, essv5608705, essv5556453, essv5675592, essv5736386, essv5417609, essv6148409, essv6391463, essv5846624, essv5715213, essv5907975, essv6067835, essv5817434, essv6595522, essv5866102, essv6458300, essv6001052, essv5949309, essv6195816, essv6066766, essv6475645, essv5656148, essv6484134, essv5773618, essv6288975, essv6288895, essv5540970, essv5476881, essv6401912, essv6024476, essv6239155, essv5732638, essv6419704, essv5942229, essv5411299, essv5651768, essv5560895, essv5753314, essv6541256, essv6287199, essv6065308, essv5807128, essv5933502, essv5537600, essv6157673, essv6444526, essv6291426, essv5446876, essv5535017, essv6566772, essv6204764, essv5422409, essv6412000, essv6074600, essv5851839, essv6358417, essv5701990, essv6433902, essv5807788, essv5931753, essv6522357, essv5847691, essv6415323, essv6302140, essv6150897, essv5649547, essv5580894, essv5791359, essv5702905, essv6476749, essv5852469, essv5411899, essv5792647
SamplesNA12383, HG00542, NA12717, HG00442, NA19058, NA18947, NA12286, NA19664, HG00671, NA19066, NA10851, HG00559, NA18565, NA12414, NA11920, NA11931, NA18999, NA19684, NA18530, NA18959, NA18616, HG01461, HG00654, NA18633, NA12750, NA12399, NA19067, NA18602, NA18988, NA18627, HG00663, NA07346, NA18940, NA18597, HG01351, NA19678, NA18567, NA18558, NA18547, HG01492, NA18618, NA18574, NA07048, NA11918, NA07347, HG01365, HG00537, NA19079, NA18949, HG00512, NA12275, NA19720, NA12156, NA11932, NA11994, HG00534, NA19722, NA18990, HG01550, NA19789, NA18539, HG01124, NA18951, NA18605, NA12489, HG00443, NA18538, NA19056, HG00557, HG00657, NA19717, NA19663, HG00556, HG00583, NA19081, HG01498, NA18579, NA12718, NA18572, NA18948, NA18534, NA18981, HG00692, NA19064, NA18548, NA18573, HG00651, NA19084, NA18626, HG00690, HG00404, HG00479, NA12829, NA11893, HG00684, NA19750, NA18532, NA06989, NA18553, HG01497, NA19059, NA19761, NA19009, NA18555, NA18963, HG00704, NA12144, HG00463, NA18593, NA12546, NA19012, NA12043, NA18953, NA19003, NA19729, HG00611, NA18632, NA19652, HG00625, NA18564, NA19747, NA18628, NA19072, HG00580, NA12272, NA19010, HG01137, NA12763, HG00662, HG00418, NA18615, NA18610, HG01489, HG00620, NA19785, NA19779, NA18609, NA19770, NA11843, NA19080, NA19780, NA18983, HG01125, HG00628, NA18624, NA19063, NA12154, NA19065, NA19074, HG01437, HG00581, NA19676, NA18620, HG00593, HG00626, HG00403, HG01441, HG00592, HG01356, HG00536, NA11995, NA18592, HG01359, HG00524, NA18980, NA18561, NA11933, NA18599, HG01389, NA18603, NA12045, HG01465, HG00699, NA19777, NA19057, NA18596, HG01456, HG00566, NA18606, NA12400, NA12155, NA07357, HG01140, NA12341, NA18967, HG01250, NA19746, NA19660, NA19076, NA19005, NA18944, HG00501, NA19762, NA19728, NA18595, HG01488, HG00689, HG00448, NA19723, NA18982, NA18635, NA12348, HG00634, NA18942, HG00610, NA11992, NA19771, NA19088, NA12287, NA19054, NA19782, NA19681, NA18964, HG00590, NA18611, NA12761, HG01134, HG01455, HG00683, NA18977, HG01495, NA19719, NA18560, NA19731, NA18617, NA18986, NA19087, NA12889, HG00427, NA19725, NA18973, HG00530, HG00419, NA18638, NA12748, NA11993, HG00464, NA19007, NA18614, NA11831, HG00543, NA18544, HG00560, NA18613, HG00629, NA19657, HG01360, NA19082, NA19077, NA12003, HG00653, HG00577, HG00701, HG00475, HG00436, HG00584, HG00533, NA18637, HG00500, NA19788, NA18630, HG00619, HG00635, HG01390, NA18566, NA19774, NA19000, NA19655, NA11894, NA12249, HG00613, HG00525, NA12827, NA19756, NA18536, NA18634, NA19675, NA18576, NA18546, NA18608, NA19685, HG00476, NA18542, NA18535, NA11881, NA18961, NA18952, NA18543, NA18559, NA12775, NA19749, NA18950, NA19732, HG01253, NA18941, NA07051, HG01494, HG00607, NA19786, NA19085, NA06986, NA19078, HG00672, NA18971, HG01491, NA19060, HG00421, NA18987, NA12830, HG00698, NA18972, NA18552, HG01251, NA19661, NA18984, HG00472, NA07056, NA19755, NA19004, HG01112, NA18549, NA18622, HG00437, NA18965
Known GenesKGFLP2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2662901
Frequency
Sample Size1151
Observed Gain0
Observed Loss324
Observed Complex0
Frequencyn/a


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