A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2662541



Internal ID9581960
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:1273158..1273806hg38UCSC Ensembl
Outerchr5:1273121..1273856hg38UCSC Ensembl
Innerchr5:1273273..1273921hg19UCSC Ensembl
Outerchr5:1273236..1273971hg19UCSC Ensembl
Cytoband5p15.33
Allele length
AssemblyAllele length
hg38736
hg19736
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5497206, essv5750335, essv5864281, essv6354251, essv6227643, essv6146304, essv5514984, essv6130064, essv6412120, essv6091272, essv5963152, essv6531734, essv6206329, essv5421310, essv5641966, essv6542229, essv6560703, essv5756300, essv6000299, essv6113922, essv5964200, essv6237152, essv6109577, essv6353509, essv6581565, essv5423503, essv5488189, essv6192255, essv5715204, essv6577160, essv6554759, essv5653125, essv6015228, essv5771821, essv6148756, essv5918403, essv5416303, essv6579617, essv5402606, essv5865609, essv6311270, essv6336756, essv6456614, essv6184974, essv5399635, essv6575585, essv5710089, essv5682044, essv5813728, essv6353570, essv5900053, essv6102894, essv6470723, essv5809060, essv5972034, essv6586403, essv5847515, essv5865473, essv6297221, essv6537583, essv6086266, essv5597428, essv6438232, essv5557610, essv6596042, essv5543671, essv5722261, essv5976349, essv6204463, essv5559778, essv5454982, essv5662039, essv6342759, essv6289118, essv5906456, essv5998373, essv5967184, essv6112093, essv5905843, essv6181329, essv6262050, essv6384341, essv6089938, essv6230060, essv6484579, essv5741689, essv6538364, essv5975733, essv6554670, essv6552125, essv6056286, essv5916591, essv6034100, essv5422111, essv5647246, essv5534054, essv6432538, essv6581683, essv5678981, essv6311906, essv5448400, essv6247594, essv6057178, essv6366214, essv5469357, essv5925142, essv6055662, essv5796540, essv5963756, essv6546756, essv5593354, essv6054458, essv6517047, essv6055209, essv6090873, essv5768025, essv5784194, essv5732554, essv5908370, essv5636125, essv5893474, essv5463559, essv5814854, essv5787040, essv6537741, essv5762422, essv6419686, essv6039876, essv6483135, essv6507694, essv5629495, essv5775329, essv6313586, essv6526552, essv5973207, essv6029693, essv6346256, essv6390623, essv5489503, essv5715251, essv6305818, essv5857697, essv5968100, essv6151813, essv5902116, essv6070688, essv6250656, essv5612983, essv6443149, essv6214824, essv5701723, essv5763389, essv6233015, essv6412626, essv5939239, essv5927246, essv6594446, essv5706239, essv6541738, essv6100977, essv6465454, essv6475058, essv5718167, essv6042594, essv6243227, essv5473004, essv5860241, essv6528951, essv5437132, essv5627467, essv5442888, essv5631117, essv6158244, essv6484551, essv6002176, essv6145582, essv5433569, essv5575261, essv5941808, essv5981024, essv6498306, essv6168771, essv5723305, essv6569244, essv5519093, essv5952584, essv6193804, essv5726504, essv5936509, essv6374139, essv5461323, essv5831174, essv6460996, essv6518276, essv5423901, essv5964677, essv5570244, essv6397661, essv6078800, essv5639323, essv6073671
SamplesHG00613, HG01441, NA18621, NA18964, HG00537, NA19436, HG00536, HG00607, HG01440, NA07347, NA18616, HG00182, NA18534, NA18561, NA19081, NA18933, HG00328, HG01055, NA18952, HG00705, HG00437, HG01342, HG01173, HG00369, NA18612, HG00731, HG00464, NA19401, HG00736, HG00160, HG00310, NA18570, NA19072, HG00707, NA19223, NA18948, HG01197, HG00614, HG01051, HG01365, NA19788, HG01492, NA20800, NA18953, HG01488, NA19010, HG01350, NA18546, HG00701, HG00698, HG00111, HG00334, HG00581, NA18963, HG00651, NA19004, HG01101, NA19682, NA19108, NA18965, NA19084, HG00699, NA19776, HG00256, NA18632, NA20770, NA19077, HG00543, HG01107, NA19062, HG00339, NA19085, HG00250, NA19076, HG00421, HG00583, NA18566, NA19057, NA18536, NA18576, NA19443, NA18617, NA18990, NA19083, NA19398, HG00338, NA18959, HG00533, HG00178, HG01136, NA19075, NA20336, NA19773, NA19681, NA19663, HG00276, NA19457, NA19082, NA19684, NA19676, NA19360, NA19725, NA19313, NA19080, HG01097, HG00108, NA18572, HG01066, HG00325, NA18498, NA19716, NA12275, NA19657, NA19731, HG01073, NA18977, NA18941, HG00672, HG01069, HG01080, NA18613, NA19720, NA18988, NA18562, NA19074, HG01383, NA18985, NA19789, HG00236, HG00589, NA18606, NA18543, NA18940, NA18987, NA12890, NA18999, HG01137, NA18597, NA12272, HG01095, HG00443, NA18599, NA18567, NA19078, NA20276, NA20332, NA18538, NA19009, HG00663, NA18989, HG00580, NA19747, NA18544, HG00448, HG00608, NA18577, HG00654, NA18614, HG00530, NA19064, HG00123, NA19749, HG00281, HG00285, HG00656, NA18571, NA19732, HG00422, HG00708, HG00367, NA18984, NA20792, NA11932, NA18611, HG01125, NA20768, HG00324, HG00641, NA18549, NA18574, HG00183, HG00442, HG01374, HG01462, NA19079, HG00626, HG00684, HG01377, NA18615, HG00143, NA19448, HG00671, HG00702, HG00278, NA19058, NA19746, HG00531, HG01354, NA18553, NA19439, HG00327
Known GenesTERT
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2662541
Frequency
Sample Size1151
Observed Gain0
Observed Loss201
Observed Complex0
Frequencyn/a


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