A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2662377



Internal ID9581796
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:3165525..3165772hg38UCSC Ensembl
Outerchr1:3165487..3165835hg38UCSC Ensembl
Innerchr1:3082089..3082336hg19UCSC Ensembl
Outerchr1:3082051..3082399hg19UCSC Ensembl
Cytoband1p36.32
Allele length
AssemblyAllele length
hg38349
hg19349
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6181202, essv5494452, essv6356412, essv6521146, essv5501467, essv6508168, essv5559838, essv6082472, essv5848289, essv6422607, essv6395125, essv5651766, essv6249623, essv5771735, essv5926716, essv6020196, essv6252831, essv6542459, essv5398800, essv5841234, essv6225449, essv5744813, essv6274084, essv6506679, essv5783985, essv5806442, essv6337398, essv6306676, essv5730609, essv6504564, essv5659194, essv5774820, essv5541246, essv6025286, essv6089295, essv6091377, essv5443857, essv6245572, essv5512908, essv5543393, essv6201697, essv6153613, essv6172207, essv5424731, essv5703019, essv5840446, essv5990786, essv5930357, essv5665526, essv5875036, essv6391630, essv6068129, essv5431659, essv6244611, essv5828794, essv6337981, essv5542135, essv5987147, essv6027703, essv5675793, essv6032443, essv5675554, essv5397932, essv5526373, essv5642389, essv6224723, essv6100803, essv5850489, essv6373808, essv5710521, essv5874746, essv5678624, essv5977786, essv5555654, essv6230481, essv5861509, essv5904917, essv5899828, essv5462076, essv5731192, essv6526641, essv5983683, essv6157596, essv6322722, essv6429513, essv5649876, essv6129654, essv5752439, essv5779366, essv6049657, essv5478028, essv6125869, essv6191098, essv5781509, essv5848025, essv6000764, essv6461104, essv6588994, essv6448046, essv5926559, essv6091505, essv6193640, essv6387702, essv6251044, essv6286208, essv5529709, essv6538462, essv5406361, essv6015486, essv6116683, essv6568601, essv6298081, essv5665082, essv6292284, essv5464148, essv5693036, essv6117538, essv6189458, essv5755154, essv5647864, essv6112108, essv5812292, essv5943685, essv5545290, essv6584466, essv6163803, essv5896676
SamplesNA18621, HG00309, NA19312, NA12043, HG00734, NA19436, HG00318, HG00607, NA18595, HG00619, NA18534, HG00344, NA18530, HG01072, HG00705, NA07056, HG00437, HG00500, HG00369, NA18612, NA20510, HG00464, HG00310, HG00707, HG01079, HG01389, HG00463, HG01365, HG00428, NA18542, HG01350, NA18546, HG00701, NA12058, NA19834, HG00111, HG00334, HG00581, HG01204, NA07051, HG00651, HG00557, HG01101, HG00331, HG00699, NA18596, HG00256, HG00342, HG00543, HG00154, HG01107, NA18559, HG00321, NA19463, HG00346, HG00250, HG01375, HG00421, HG00337, NA18635, NA18536, NA18990, HG01183, HG01124, HG00315, HG00330, HG00338, HG00150, HG00533, HG00125, HG01136, NA18637, HG00276, HG00584, HG00436, HG00159, HG00620, HG00124, NA18620, HG00653, NA19657, HG01073, NA18558, HG00672, HG01170, HG01069, HG00249, HG00478, HG00277, HG01080, HG01351, HG00513, NA19720, HG00534, HG01060, NA18910, NA18606, NA18543, HG00151, NA18619, HG00427, NA18597, HG00590, HG00443, NA18599, HG01334, HG00650, HG00580, NA18544, NA18548, HG00123, HG00656, HG00422, HG00708, HG01125, HG00251, HG01498, HG00324, HG00690, NA18549, NA18574, HG00442, HG01374, HG01462, HG00702, NA18519, HG01067
Known GenesPRDM16
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2662377
Frequency
Sample Size1151
Observed Gain0
Observed Loss127
Observed Complex0
Frequencyn/a


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