A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2662006



Internal ID9928111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:157570860..157571086hg38UCSC Ensembl
chr1:157540650..157540876hg19UCSC Ensembl
Cytoband1q23.1
Allele length
AssemblyAllele length
hg38227
hg19227
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5434026, essv6528671, essv6060296, essv6034840, essv5784048, essv6140133, essv6330703, essv6220418, essv6071977, essv6027721, essv5672961, essv6299505, essv6120404, essv5508250, essv6239621, essv5449230, essv5904010, essv5411342, essv6557059, essv6092524, essv5567330, essv5448257, essv6566653, essv6365944, essv5924275, essv5918053, essv5517822, essv5465464, essv6470187, essv6170322, essv5948247, essv5836054, essv5783952, essv6393301, essv6379110, essv5746358, essv5891655, essv5871448, essv6528869, essv6350697, essv5688897, essv6421514, essv6386513, essv6526280, essv5603561, essv5652240, essv5570720, essv5997989, essv5814540, essv6258438, essv5804979, essv6482177, essv5785490, essv5871779, essv5616716, essv5715017, essv6344032, essv6148709, essv5527672, essv6081453, essv5502208, essv6522364, essv5798591, essv6173597, essv5647686, essv6532098, essv6032630, essv5854416, essv6507402, essv6583404, essv6315865, essv5732836, essv6405553, essv6568792, essv5610838, essv6006725, essv5627609, essv5844344, essv5529954, essv6063626, essv5562073, essv6184881, essv6108615, essv5930490, essv6428226, essv6343385, essv6095918, essv5933492, essv6475338, essv5822291, essv5803749, essv6597406, essv6182999, essv5841896, essv6372507, essv6375602, essv5613984, essv5573310, essv6560970, essv6217872, essv5563992, essv6153086, essv6316895, essv6566845, essv5600795, essv6137923, essv6034508, essv6105198, essv5543617, essv6343693, essv6168935, essv6013465, essv5728811, essv6269116, essv6032859, essv6272477, essv5965782, essv6491890, essv5969436, essv6584925, essv6184328, essv6028930, essv6216408, essv6229070, essv6510034, essv6133221, essv5905177, essv5791518, essv5646669, essv6302729, essv5789644, essv5734128, essv5766960, essv6102276, essv5417548, essv6101459, essv5780801, essv6496780, essv6320827, essv6340694, essv5731643, essv5441164, essv6490265, essv5815054, essv5898450, essv6382740, essv5654305, essv6472813, essv5546743, essv6214851, essv5914391, essv6372802, essv5929199, essv6460250, essv6189937, essv6004759, essv6277298, essv6201045, essv5824744, essv5879631, essv5792010, essv5892149, essv6530343, essv6212508, essv6543470, essv6244868, essv5772347, essv6466512, essv6322258, essv5889799, essv5801024, essv5806898, essv6439616, essv6090321, essv6398567, essv6350238, essv5921106, essv6466207, essv5650679, essv5803137, essv5406564, essv6482031, essv6550036, essv6573233, essv6021052, essv5860497, essv5599800, essv5588575, essv5512824, essv5445803, essv6567163, essv5821251, essv6201483, essv5514034, essv5561520, essv6498357, essv6095454, essv6183887, essv5428442, essv5398995, essv5712251, essv5648910, essv5812893, essv6166862, essv6321550, essv5882252, essv5652236, essv5750696, essv5484731, essv6408689, essv5480714, essv5888719, essv6524627, essv5808996, essv5757995, essv5428007, essv6476540, essv6385680, essv5975994, essv6142064, essv6309681, essv5845118, essv6426644, essv5634895, essv6296724, essv5939113, essv5618398, essv5677781, essv6416319, essv5564839, essv6071079, essv6046781, essv5671459, essv5889906, essv6488051, essv6158377, essv5779294, essv6155710, essv5883765, essv6585462, essv5458668, essv6381470, essv5573983, essv5469917, essv5625218, essv5576199, essv5692909, essv6288607, essv5701200, essv6285413, essv6099178, essv6380843, essv6234203, essv6457696, essv6277837, essv6270100, essv6382855, essv5654413, essv5500044, essv6105143, essv5797942, essv5481937, essv6233012, essv6162089, essv6341805, essv6318909, essv6164685, essv6382024, essv6237201, essv6148225, essv5438618, essv5650793, essv5606040, essv6577088, essv6466872, essv5621440, essv6379300, essv5784219, essv5503623, essv6456164, essv5972010, essv6466399, essv5868875, essv5622489, essv6301980, essv5532615, essv6223040, essv6179814, essv5847813, essv5959164, essv5640353, essv5644408, essv6253762, essv6556884, essv5840113, essv6534525, essv6479860, essv6329349, essv6215852, essv5666339, essv6068070, essv6341500, essv5480396, essv5721050, essv5588784, essv6145549, essv6330370, essv5836374, essv6481978, essv5922910, essv6482531, essv6394288, essv5869575, essv6102598, essv5535580, essv6583091, essv5778101, essv6562230, essv5959422, essv5987673, essv6374508, essv6513299, essv6401847, essv5488292, essv6531487
SamplesHG00650, HG00542, HG00442, HG01173, HG00143, HG01462, NA18621, NA18947, HG00671, HG00559, NA20783, NA18565, NA12414, NA11920, NA11931, HG01066, HG00315, NA19350, NA12751, NA18504, NA18530, HG00449, HG00654, HG01051, NA18633, NA20771, NA18602, HG00693, HG00337, HG00271, NA12813, HG00663, NA07346, NA18563, HG00138, HG01350, NA19379, NA18940, HG00589, HG00272, NA18597, HG01351, NA18923, NA18567, NA18558, HG01492, NA18960, NA07347, NA18582, HG01083, HG01365, HG00537, NA18949, HG00512, HG00281, HG00139, HG01069, NA19720, HG00335, NA20812, HG00325, NA12044, HG00534, HG00705, NA18557, HG01048, HG01133, HG00326, HG00253, HG01124, HG00137, HG00154, NA18951, NA18605, HG00443, HG00282, HG00557, NA12878, HG00657, NA19663, HG00556, HG00583, HG00275, NA18579, NA18572, HG01149, NA18948, NA18534, HG00692, NA18548, HG00740, NA18537, HG01047, HG01102, HG00324, HG00284, NA18573, NA11919, HG00651, HG00250, HG00690, HG00404, HG00531, HG00479, HG00331, NA18532, HG01101, HG01334, NA18555, HG00704, NA12144, HG00463, NA19469, NA19395, NA18570, NA18593, NA18953, HG01148, HG00611, NA18632, HG00254, HG00336, HG00625, HG00353, NA19072, HG00580, HG01357, HG01174, HG01375, HG00473, HG00237, HG01137, NA18943, NA19360, NA12763, HG00662, HG00418, NA18610, HG00620, HG00339, HG00614, HG00478, HG00259, HG00342, NA18636, NA18609, HG00310, HG00280, HG00274, HG00595, HG00628, NA18968, NA12154, NA18612, NA19074, NA18577, HG00626, HG00403, HG01060, HG01441, HG00592, HG00536, HG00249, NA11995, NA11829, NA18592, HG00524, NA18980, NA18561, HG01188, NA18599, HG01374, NA18603, HG00318, NA18486, HG00699, NA18545, NA12004, NA19777, NA18596, HG00566, NA18606, NA20507, NA18526, NA12155, NA19374, NA19746, HG00127, NA19381, NA19076, NA18550, HG01366, HG01070, HG00501, NA19382, NA18595, HG00702, HG00689, HG00448, HG00173, NA18982, NA18635, HG00634, HG00736, HG00610, NA11992, HG01354, NA19088, HG00247, NA18964, HG00590, NA18611, NA12761, HG01134, NA12282, HG01067, HG00683, HG01170, NA18977, HG01072, NA18560, NA19075, HG00422, NA19087, NA19002, HG00427, HG00338, HG00159, NA12828, NA18973, HG00530, HG00419, NA18638, NA12748, NA20818, NA19007, NA18614, NA10847, HG01353, HG00543, HG00313, HG01136, HG00149, NA18544, NA18613, HG00629, NA19657, HG00183, HG01187, NA19707, HG00596, HG00328, HG00428, NA18956, HG00701, NA19391, HG00475, HG00436, HG00584, HG00533, NA18637, HG00500, HG00619, HG00708, HG00635, NA18566, HG01073, HG00273, NA12892, HG00613, HG00321, HG00276, NA18536, HG01204, NA18576, NA18608, HG00476, HG00124, NA18542, HG00285, NA19108, NA18961, NA18952, NA18543, NA18559, HG00565, HG00375, HG00136, HG00638, NA19240, HG00278, NA19380, NA07051, HG00607, HG00319, HG00256, HG00125, HG00707, HG00672, HG00111, HG00578, HG00312, HG00329, NA18987, NA12749, HG00656, NA12830, HG00186, HG00698, HG00131, NA18552, HG00252, HG01377, HG00472, HG01378, NA19755, HG00345, HG00554, NA18549, HG00180, NA18622, HG01061, HG00437, NA18562, NA18965
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2662006
Frequency
Sample Size1151
Observed Gain0
Observed Loss325
Observed Complex0
Frequencyn/a


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