A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2661968



Internal ID9581387
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:32554856..32581724hg38UCSC Ensembl
chr6:32522633..32549501hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3826869
hg1926869
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1108e199
Supporting Variantsessv6334774, essv6504667, essv6143552, essv5809068, essv5668361, essv5401238, essv6564556, essv6476479, essv5871355, essv5563476, essv6591756, essv6418249, essv5430379, essv5698700, essv5543079, essv6394340, essv6455112, essv6228772, essv6005752, essv5513749, essv5842040, essv6587217, essv6122089, essv5795694, essv5842759, essv6166009, essv5915420, essv5612259, essv5494113, essv5646774, essv6120085, essv5539957, essv6112423, essv6053874, essv5900137, essv6593668, essv6401242, essv5488620, essv5436328, essv5723128, essv6456390, essv5771340, essv5821587, essv5813412, essv6285770, essv6274989, essv5461856, essv6248637, essv6212251, essv6200374, essv6364478, essv5970721, essv5705088, essv5403022, essv5459395, essv5395548, essv5716895, essv6062614, essv6412941, essv6318967, essv5544919, essv5957339, essv6508302, essv5511507, essv6493250, essv6405664, essv5933726, essv5398568, essv6268748, essv5396438, essv6311403, essv6139774, essv6132205, essv5905951, essv5770607, essv6111639, essv5402473, essv6049313, essv6119535, essv6455013, essv6041737, essv5913055, essv5677223, essv6429541, essv6417497, essv5757826, essv5722060, essv5444819, essv5904538, essv5470728, essv6064066, essv5596987, essv5977445, essv5586240, essv6412046, essv5891974, essv5873624, essv6589203, essv5820891, essv6086561, essv5845225, essv5658260, essv5765665, essv5408960, essv5926223, essv5898781, essv5523407, essv5739349, essv5411258, essv6139405, essv5797353, essv6325933, essv6515829, essv6284735, essv6544433, essv6092341, essv5827905, essv6415899, essv5516613, essv6003368, essv5610850, essv5445021, essv6027115, essv5692601, essv5536509, essv5862685, essv5500448, essv6420267, essv5523262, essv6009977, essv5663626, essv5599774, essv6336550, essv5849261, essv5488423, essv6533026, essv6461251, essv5443109, essv5666512, essv5709528, essv6169964, essv6392291, essv5477324, essv6451228, essv5533510, essv5989746, essv5430612, essv6428634, essv5939706, essv5908107, essv5402930, essv6080010, essv6026579, essv6067225, essv6322644, essv6487894, essv5589393, essv6178371, essv6351006, essv6158939, essv5504126, essv6597757, essv6315817, essv6137838, essv5561510, essv6387565, essv6311479, essv5553893, essv5441677, essv6187447, essv6558887, essv5945916, essv5552274
SamplesNA20588, NA12383, NA19701, HG00650, HG00542, NA11830, NA19700, NA12842, HG00536, NA18924, NA20508, HG01359, HG00559, NA12843, NA11933, NA20816, HG00244, NA19350, NA18486, HG01465, HG00153, NA20805, NA19057, HG01456, HG00449, HG00150, HG00654, NA19443, NA19190, HG01051, NA19920, HG01522, HG00693, NA18988, NA18627, HG00337, HG00327, NA20537, NA19068, NA19660, NA19005, NA18519, HG00589, NA19319, NA19678, NA20756, NA19198, NA20795, NA19916, HG00610, NA18574, NA19457, NA19313, HG01365, HG00334, HG01110, NA20541, HG00683, NA18874, NA06984, HG00262, NA19719, NA20340, NA19471, NA18986, HG00427, NA20811, NA18990, NA18557, HG01133, NA19445, NA18638, HG00108, NA20818, NA12777, HG01136, NA19657, HG00443, HG01171, HG00282, HG00732, HG00653, NA20521, HG00657, NA20536, NA19455, HG00500, NA20506, NA19658, NA20770, HG00740, NA20525, NA18566, HG01094, HG00284, NA19655, HG00331, NA18499, NA12249, NA18912, NA06989, HG00117, NA20282, NA19257, NA18963, HG00463, HG00246, NA20534, NA18945, NA18953, NA19003, NA20799, NA18632, NA19440, NA19834, NA12775, NA19473, NA18628, NA19072, HG00580, HG01551, HG00734, HG00278, NA20785, HG00098, HG01375, NA19334, NA20792, NA20504, NA20544, NA19467, HG00116, NA18943, NA20797, NA07037, HG00418, NA20341, NA19818, NA19759, NA19078, HG00672, NA19785, NA19248, NA19438, NA19472, NA19779, HG00329, NA18987, HG00656, NA20334, NA19713, NA19474, NA12830, NA18609, NA20786, NA18873, HG00112, HG00131, NA19726, NA20758, NA19116, NA18552, NA19900, NA18983, NA18984, NA07056, HG01125, NA19463, NA18522, NA12154, HG00581, HG00255, NA20509
Known GenesHLA-DRB1, HLA-DRB6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2661968
Frequency
Sample Size1151
Observed Gain0
Observed Loss173
Observed Complex0
Frequencyn/a


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