Variant Details

Variant: esv2661819

Internal ID

9927924

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr1:235709427..235709963	hg38	UCSC Ensembl
	chr1:235872727..235873263	hg19	UCSC Ensembl

Cytoband

1q42.3

Allele length

Assembly	Allele length
hg38	537
hg19	537

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6383336, essv6295158, essv6441223, essv6352876, essv6151554, essv6128935, essv6303153, essv6561344, essv6249096, essv6209551, essv5793401, essv5402416, essv6317303, essv5910750, essv5404679, essv5965408, essv6581498, essv6087533, essv6481550, essv6325373, essv5564211, essv5407869, essv6170201, essv5773687, essv5422588, essv6368001, essv6029881, essv5944346, essv6417492, essv5775448, essv5565985, essv6419808, essv5719996, essv6398487, essv6069635, essv6084030, essv6022190, essv6177428, essv6558312, essv5486201, essv5948267, essv5729265, essv6403514, essv5811770, essv6256026, essv5965384, essv6253043, essv6528531, essv5581311, essv6290232, essv6211525, essv5539960, essv5486116, essv5701598, essv6416361, essv6183866, essv5806715

Samples

NA18561, NA12045, NA19350, NA18486, NA20294, NA18504, NA19377, NA20356, NA19920, NA18519, HG01365, NA19383, NA18874, NA18868, NA19172, NA18520, NA19239, NA18908, NA18867, NA19908, NA12489, NA19707, NA19462, NA19347, NA19455, NA19236, NA20126, NA18910, HG01390, NA19654, NA19114, NA20282, NA19257, NA18555, NA12144, NA19318, NA18576, NA19440, NA18517, NA19712, NA19435, NA19240, NA19380, NA19428, NA20281, NA19328, NA18501, NA19474, NA19093, NA19116, NA19711, NA19213, NA19312, NA12006, NA19463, NA18487, NA18562

Known Genes

LYST

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2661819

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	57
Observed Complex	0
Frequency	n/a