Variant Details

Variant: esv2661691

Internal ID

9927796

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr19:46314067..46315468	hg38	UCSC Ensembl
	chr19:46817324..46818725	hg19	UCSC Ensembl

Cytoband

19q13.32

Allele length

Assembly	Allele length
hg38	1402
hg19	1402

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6429521, essv6006491, essv6555806, essv5716545, essv6273783, essv5924800, essv5559876, essv5960137, essv5611615, essv5945993, essv5642418, essv6531418, essv6224566, essv6223163, essv6004794, essv6337347, essv6444533, essv6577291, essv6148589, essv6010015, essv5979100, essv5729574, essv5780217, essv5758788, essv5520064, essv5934698, essv6328060, essv5639242, essv6430129, essv5429020, essv5607171, essv6085342, essv5613776, essv6249376, essv6409468, essv6236113, essv5924400, essv5824456, essv5451433, essv6294623, essv6532763, essv6092944, essv5919816, essv5724297, essv5944996, essv6349743, essv6288773, essv5552717, essv5980205, essv6341608, essv6544998, essv6147030, essv5891364, essv6008167, essv6531527, essv5892784, essv6298470, essv5869672, essv5623289, essv5627030, essv6137049, essv6437005, essv5724685, essv6177784, essv5819572, essv6205200, essv6160846, essv6333801, essv5966841, essv6015115, essv5700464, essv5685611, essv6496732, essv5442523, essv5406504, essv6170698, essv6092166, essv5775205, essv5831120, essv6430217, essv6367891, essv5787927, essv5975938, essv6269417, essv6204200, essv5663943, essv5946752, essv6012655, essv6410183, essv5401977, essv5756103, essv5978696, essv5608729, essv5910485, essv6085117, essv6348114, essv6473935, essv6304527, essv6204091, essv5887935, essv6104300, essv5948548, essv5936749, essv5697541, essv5513438, essv5520753, essv5571670, essv5495570, essv6564224, essv5424796, essv6413929, essv5967758, essv5444066, essv5421775, essv6338367, essv5800445, essv5781881, essv5792993, essv6360257, essv5426377, essv6060759, essv5702071, essv6576255, essv5950401, essv5726586, essv5964181, essv5723756, essv5425350, essv5565832, essv5501588, essv6230374, essv5876592, essv5723871, essv6270300, essv5405249, essv6059811, essv5969947, essv5577547, essv6077394, essv6142881, essv6259926, essv5660898, essv6389767, essv6307752, essv5573738, essv5705964, essv6533283, essv6116963, essv6160808, essv5504732

Samples

HG00189, NA19648, HG01173, NA19058, NA19055, NA18621, HG01052, NA18565, HG01066, HG00315, NA18999, NA19057, HG00566, NA20332, NA18959, NA18616, HG00654, NA18633, HG01140, NA18988, NA18627, NA12341, HG00663, NA18967, NA19374, HG00138, NA19660, NA19005, NA18944, NA18940, NA18550, HG01488, HG00448, HG01168, NA18982, HG00330, HG01492, NA18942, NA19062, NA19771, NA19457, NA19054, HG01365, NA18964, NA19079, NA18949, HG01134, NA12282, HG01069, HG00683, HG01170, HG00236, NA18977, HG00262, HG00534, NA19075, NA19087, NA19002, NA18990, HG01198, NA18975, HG00464, HG01124, HG00313, HG00154, NA18951, NA18544, NA20535, NA18613, HG00629, NA20800, HG00443, NA18538, NA19070, NA12342, NA19077, HG00428, HG00584, HG00344, NA19081, NA18572, NA18976, NA18948, NA18534, NA18630, NA18981, HG00708, HG00635, NA19449, NA19084, HG00684, HG01383, HG00525, NA18553, NA19059, NA19009, HG00276, NA18963, HG01107, NA18945, NA19012, NA18546, HG01148, NA19003, HG00611, NA18632, NA18961, NA18952, NA18559, NA19072, NA18950, HG00734, NA18941, NA19010, HG00319, NA19083, HG01108, NA19783, NA19085, HG00620, NA19818, HG00707, HG00672, HG00614, HG00513, NA19785, NA19779, NA18987, NA18873, NA19080, NA19213, HG00343, NA18983, NA19661, HG00595, NA18989, HG01378, NA19004, HG01082, HG01125, NA19463, NA19063, NA18612, HG00180, NA19074, NA18622, HG00437, HG00581, NA18965, NA18620

Known Genes

HIF3A

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2661691

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	150
Observed Complex	0
Frequency	n/a