A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2661677



Internal ID9581096
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:69163010..69163328hg38UCSC Ensembl
chr9:71777926..71778244hg19UCSC Ensembl
Cytoband9q21.11
Allele length
AssemblyAllele length
hg38319
hg19319
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6391295, essv5496545, essv6332172, essv6047607, essv5667197, essv6509124, essv5924512, essv6205931, essv5650632, essv6158136, essv6268147, essv5416567, essv5463574, essv5936995, essv6026583, essv5635247, essv6222423, essv6236865, essv6118477, essv5746256, essv5830925, essv6572900, essv5425834, essv5581524, essv5876650, essv6389019, essv5676745, essv6145296, essv6438516, essv6145600, essv5455051, essv5542021, essv6198421, essv5500136, essv6095174, essv5558109, essv5849153, essv5541400, essv5927732, essv5940195, essv6550447, essv5668227, essv6442503, essv5940838, essv6336961, essv6313256, essv5667545, essv6070621, essv6102586, essv6107585, essv5610020, essv5521292, essv5667119, essv5870671, essv5679705, essv5398404, essv5708849, essv6579012, essv5778399, essv5784558, essv6300317, essv6317159, essv5847030, essv6305420, essv6206358, essv5823363, essv5422606, essv5496633, essv5836662, essv5972590, essv5957188, essv5621836, essv5605505, essv5965613, essv6442447, essv6437558, essv6517777, essv6490837, essv6188111, essv5446602, essv5507077, essv6337961, essv5537622, essv6082080, essv6550110, essv5552390, essv5642726, essv6464045, essv6547755, essv5444494, essv6138887, essv5495420, essv5506473, essv6144969, essv6178351, essv5790770, essv6359491, essv5723784, essv5878822, essv6017515, essv6145231, essv5455094, essv6099046, essv6501552, essv5441545, essv5419815, essv5421445, essv5753823, essv5903421, essv5845499, essv6097902, essv6133883, essv5473299, essv5928421, essv6005524, essv6459743, essv5691733, essv5402367, essv5505485, essv5817065, essv6355033, essv5579943, essv5960786, essv6517831, essv6322533, essv5530664, essv5434859, essv5994784, essv6216125, essv6220012, essv6427550, essv5617664, essv5639006, essv5752467, essv6082268, essv5940486, essv6467620, essv6522843, essv5399647, essv5827195, essv5731885, essv5822990, essv6010754, essv6019177, essv6227690, essv5599760, essv5699209, essv5712431, essv5791657, essv6283777, essv6117115, essv6105280, essv6355625, essv5763703, essv6570519, essv5956464, essv6424554, essv5700913, essv5806365, essv6584602, essv6137319, essv6490214, essv5854197, essv5404438, essv5822476, essv5981056, essv5674779, essv6479799, essv5498312, essv5815491, essv5494052, essv5983527, essv6118669, essv5562127, essv5591297, essv5768641, essv5854165, essv5702390, essv5450252, essv5537475, essv5613774, essv5872031, essv6500877, essv5559654, essv6155348, essv6083289, essv5558336, essv5860387, essv6332834, essv5515179, essv5811346, essv5489586, essv5901576, essv5731765, essv6346133, essv6346419, essv6485995, essv5598074, essv6014447, essv5911421, essv5655731, essv6515512, essv5721214, essv6181485, essv6539407, essv6276656, essv6520861, essv5865614, essv5900827, essv5646618, essv5476486, essv5713728, essv5909133, essv5565223, essv5554772, essv5565680, essv5545597, essv6115604, essv6051028, essv5753831, essv5711910, essv6019970, essv6467973, essv5611627, essv5932934, essv6349281, essv5766814, essv6181011, essv6528860, essv6119477, essv6159363, essv6537893, essv6443714, essv5418813, essv5994196, essv5403575, essv6573941, essv5588881, essv6293338, essv6310830, essv6311380, essv5900874, essv6066176, essv6359331, essv5848998, essv5962657, essv5556480, essv5705947, essv5772303, essv5948338, essv6212672, essv6357401, essv5519730, essv5575010, essv5908788, essv6187499, essv6292477, essv6527083, essv5400569, essv6061721, essv6234742, essv5628498, essv5692560, essv6183791, essv6195852, essv6211949, essv6088788, essv6251377, essv5413332, essv6466692, essv6024952, essv5757062, essv5812267, essv5878130, essv6151689, essv6413019, essv6479517, essv5434569, essv5914024, essv6412945, essv6075137, essv6471570, essv6287925, essv5825119, essv5850654, essv6380807, essv6093569, essv5412944, essv5689849, essv6076641, essv5643383, essv5538649, essv5631082, essv5932676, essv6257809, essv6301645, essv6512489, essv6273492, essv5851651, essv5465895, essv5709885, essv6156919, essv5640464, essv5903701, essv5919165, essv6212715, essv6230284, essv5433309, essv5711815, essv6460026, essv5895176, essv6079652, essv6312271, essv6070739, essv6288462, essv5824074, essv5910348, essv5743507, essv5894797, essv5928475, essv5714623, essv5978485, essv5767265, essv5463500, essv5629026, essv5784891, essv5865070, essv6519733, essv5980124, essv6342194, essv5450875, essv5829362, essv5829446, essv5678033, essv5877943, essv5878619, essv6383828, essv6557046, essv6431768, essv5926976, essv5686358, essv6434386, essv5879475, essv6047982, essv6073094, essv5464876, essv5568247, essv5740850, essv5483498, essv5416500, essv5595522, essv5503844, essv6083473, essv5772247, essv6372609, essv6423396, essv6113679, essv6575499, essv6260595, essv5808240, essv5450231, essv5548499, essv6023387, essv5641457, essv5942292, essv5944462, essv5528144, essv6030538, essv6279266, essv5422940, essv5830503, essv5891108, essv6499273, essv6061334, essv6123002, essv6142888, essv5660403, essv5847623, essv5489767, essv5818424, essv6576053, essv6585500, essv6398708, essv5794045, essv6002497, essv6575255, essv5788296, essv6352421, essv6513256, essv6517799, essv6567032, essv5880024, essv5538639, essv5850162, essv6040824, essv5597606, essv5673683, essv5877734, essv5604692, essv5990052, essv5506411, essv6236117, essv6414895, essv6506318, essv6549383, essv6512758, essv5673390, essv5935018, essv6141993, essv5561424, essv6452811, essv5537971, essv5568104, essv6436096, essv6259947, essv6544854, essv5477493, essv5998539, essv5560741, essv5924980, essv6121972, essv5722683, essv6325632, essv5604928, essv6211421, essv5760175, essv6100827, essv6295284, essv5832703, essv5447942, essv5550167, essv5677338, essv5782000, essv5512254, essv5775761, essv6153394, essv5594337, essv5724164, essv6158564, essv5935091, essv5658808, essv5874957, essv6316676, essv6422553, essv6440297, essv5858715, essv6107568, essv6448237, essv5775177, essv5895760, essv6409340, essv5666397, essv6305717, essv6317791, essv5878332, essv6586010, essv6394005, essv5589234, essv6061547, essv6396023, essv6505337, essv6510253, essv6014772, essv5452678, essv5622985, essv5855524, essv6298541, essv5491931, essv5618699, essv5631018, essv5878925, essv6381561, essv5535365, essv6027988, essv6230238, essv6570468, essv5451345, essv5799839, essv5713100, essv6373435, essv5732769, essv6276453, essv5428556, essv5938978, essv6240578, essv6527944, essv6591875, essv5939040, essv6242597, essv5762493, essv6501417, essv5404984, essv5677255, essv6018356, essv5559034, essv6341224, essv6528466, essv5564549, essv5949959, essv6336045, essv6451982, essv5659847, essv6088545, essv6312225, essv6383235, essv5626847, essv6135663, essv5644335, essv5462255, essv5717592, essv6071269, essv6071874, essv5630930, essv5592462, essv5696746, essv6414433, essv6420128, essv5683567, essv6349811, essv5574605, essv6166558, essv5980517, essv5993906, essv5527224, essv6048703, essv5925869, essv6288380, essv5636673, essv6531885, essv5699351, essv5718959, essv5421451, essv5468460, essv5838268, essv6305476, essv6314012, essv6442866, essv6012671, essv5997803, essv6067567, essv5600992, essv5515657, essv5672872, essv6456017, essv6427460, essv5673755, essv5915592, essv6396796, essv5500882, essv5737546, essv5938432, essv6148198, essv5746571, essv6464415, essv6592109, essv5939214, essv6452584, essv6525692, essv5416773, essv5535296, essv6010139, essv5652961
SamplesHG00613, HG01441, NA19207, NA18870, NA12154, NA18951, NA18530, NA19081, HG00328, HG00705, HG00437, HG00500, HG00112, HG00464, NA12347, NA19093, HG00131, NA20544, HG00565, NA19311, NA19469, NA20346, HG01079, HG01389, HG00463, HG01365, HG00189, NA19788, NA19331, NA20800, HG01082, NA18953, HG01488, NA18517, HG00428, HG00475, NA18947, HG00542, HG01174, NA19920, HG01350, HG00139, NA18489, NA19144, NA18546, NA19379, NA12058, NA18507, HG00683, HG00698, HG00581, NA19685, HG00187, HG00404, NA19651, HG01101, HG01134, HG01168, NA19257, NA19701, NA20798, HG00319, HG00737, HG00699, NA18557, NA12287, NA18943, NA18950, NA19761, HG01171, HG00353, NA18596, NA18628, NA18949, NA18868, NA20340, HG00554, HG00592, NA12414, HG01107, NA19463, HG00556, NA11919, NA18967, NA19239, NA18627, HG01375, NA19390, HG00421, NA12004, NA18635, NA20811, NA18536, NA19675, NA18622, NA19471, HG01048, HG01061, NA20530, NA18617, NA18990, HG00692, HG01183, NA18636, HG01124, NA18592, HG00315, NA12761, NA18956, HG00338, NA18959, HG00533, HG00125, NA11894, NA18637, HG01253, NA18916, HG00174, HG00634, NA18593, HG00276, HG00284, HG01187, NA19457, NA19700, HG00343, NA19082, HG00662, NA19728, NA19190, NA19055, NA20769, HG00373, NA19360, NA19725, HG00267, NA19380, HG01437, NA19786, HG01097, NA07346, NA12716, HG01465, NA19129, NA18633, NA20291, HG01191, HG00640, NA12778, NA19384, HG00325, NA19716, NA20795, NA18968, NA18986, NA12275, NA19005, NA19119, NA19664, HG00501, HG00672, HG01170, HG01069, NA18961, HG00277, HG01080, HG01351, HG00740, HG00524, NA19720, HG00534, HG00525, NA12283, NA18910, HG01383, NA19711, NA19789, HG00236, NA19777, NA18940, NA18987, NA12890, HG00427, HG01137, NA19376, NA19729, NA19391, NA19723, NA19201, NA20276, NA18538, NA20287, NA18544, HG00608, HG00654, HG01390, NA12878, NA18614, HG00530, NA18548, NA11830, HG00123, HG00285, NA18944, HG01366, NA19732, NA19371, HG00708, NA18610, NA12045, NA11932, NA19756, NA19240, HG00275, HG00625, HG00690, NA12717, HG00641, HG00183, HG00473, NA18981, NA19350, HG00626, HG01377, NA18615, HG00671, NA19087, HG00702, HG00704, NA18555, NA19385, HG00271, NA19661, NA19746, HG00531, NA18553, HG00323, NA19137, NA12827, HG00313, NA12043, NA19152, NA19445, NA19625, HG00734, HG01359, NA12249, NA18861, HG00318, HG00536, HG00607, NA11930, NA19321, NA20522, HG01250, HG00344, HG01072, HG01075, NA18561, HG00127, HG01055, NA18952, NA18975, NA18874, HG00369, NA18612, HG00245, HG00596, NA19783, NA19401, HG00736, HG00449, NA18570, NA19003, NA19072, HG00261, NA18511, HG01098, NA18948, NA19430, NA19670, NA11931, NA19317, NA12813, HG01492, NA18972, NA18573, NA18608, NA18542, NA19782, HG01182, NA19210, HG00701, NA19834, HG01188, HG01204, NA12776, HG00651, NA19004, NA19678, HG00557, HG00578, HG00331, HG00146, NA18965, NA19780, NA19147, NA19776, HG00479, NA19438, NA19654, HG01133, HG00256, NA18632, HG00342, HG00635, NA19762, HG00115, HG00543, HG00154, NA18559, HG00321, NA19726, NA19428, NA18912, NA18624, HG00250, HG01140, NA18508, NA19054, NA20515, HG00472, NA19652, HG00583, NA18566, HG00337, NA11994, NA19057, NA19068, NA19660, HG00638, NA18576, NA18960, HG00180, NA18563, NA18618, NA07357, NA19900, NA19722, HG00610, NA18991, NA20801, NA20807, HG00689, NA20754, NA18856, HG00628, HG00330, NA18638, NA19398, NA19440, NA20541, NA19774, HG00178, HG00419, NA18547, NA12829, NA18976, HG01113, HG01136, NA18973, NA19835, NA19773, NA18982, NA19681, NA19056, NA19663, NA12830, NA18634, HG00584, NA19316, NA19684, NA18539, NA19676, HG00436, HG00159, HG00620, NA19377, NA19153, NA19785, HG00108, NA18537, NA19172, NA19759, NA12892, NA18572, HG00268, NA19373, HG00629, NA18498, NA18486, HG00559, NA18522, NA19238, HG00260, NA19657, HG00560, NA19731, HG01073, NA18558, NA19098, NA18941, NA19901, HG01176, HG01356, NA18504, NA19704, NA20814, HG00478, NA18564, NA18858, NA18942, NA19347, NA18613, HG00513, HG00329, HG00512, HG01070, NA19707, HG00246, NA18562, NA19074, NA19131, NA19159, HG01060, NA19382, NA18579, NA18974, NA18985, HG00589, NA18945, HG01149, NA18606, NA18543, NA10851, NA18582, NA18999, HG00590, HG00595, NA18552, NA18983, HG00443, NA18599, NA18907, HG00181, NA18567, HG00611, HG01334, HG00650, NA06984, NA19394, NA19403, NA18565, HG00138, HG00663, HG00262, NA18560, NA18989, HG00580, NA18971, HG00448, NA18602, NA18577, NA20509, NA19452, NA20507, NA18533, NA11992, NA12003, NA19064, NA19770, NA19749, HG00281, NA11993, NA19717, HG00656, NA12842, NA19160, NA19655, NA18571, HG00422, HG01251, NA19070, NA18984, HG00693, NA18611, HG01125, HG00251, NA19171, NA20768, HG00324, NA18532, NA18549, NA18574, NA18853, HG00442, HG01374, HG00137, HG01102, HG01462, HG01489, NA19079, NA19381, NA19473, NA20524, HG00684, HG00143, NA19758, HG00336, HG00476, NA19200, HG00278, NA19007, HG00136, NA18519, NA19065, NA07000, NA18980, HG01067, HG01198, NA19012, NA11881, NA18621, HG00309, HG00157, NA12489, HG00537, NA18605, NA07347, NA18595, HG00182, HG00619, NA18534, HG01353, NA18630, HG00418, NA19819, NA12342, NA19114, HG01173, NA11920, HG01083, NA18501, NA18526, HG00155, NA10847, NA18545, NA18603, HG01197, NA19359, HG00614, HG01051
Known GenesTJP2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2661677
Frequency
Sample Size1151
Observed Gain0
Observed Loss562
Observed Complex0
Frequencyn/a


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