A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2661677



Internal ID9581096
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:69163010..69163328hg38UCSC Ensembl
chr9:71777926..71778244hg19UCSC Ensembl
Cytoband9q21.11
Allele length
AssemblyAllele length
hg38319
hg19319
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6273492, essv6138887, essv6005524, essv5928475, essv5652961, essv6141993, essv6198421, essv6510253, essv5731765, essv5822990, essv5611627, essv5732769, essv5559654, essv5830925, essv5588881, essv6547755, essv6010754, essv6485995, essv6188111, essv5444494, essv6391295, essv5451345, essv6166558, essv5940838, essv5672872, essv6442503, essv5891108, essv5818424, essv5592462, essv6018356, essv6431768, essv6501552, essv6113679, essv6102586, essv5791657, essv5740850, essv6592109, essv6211949, essv5753823, essv6427550, essv5604928, essv5668227, essv6452584, essv5403575, essv6100827, essv5505485, essv5629026, essv5433309, essv6093569, essv5928421, essv6010139, essv5535365, essv5877734, essv5944462, essv6107568, essv6148198, essv5613774, essv5545597, essv6550447, essv6115604, essv6512758, essv5600992, essv5994784, essv5895176, essv6342194, essv5926976, essv5806365, essv6234742, essv5980124, essv5965613, essv5639006, essv5491931, essv5894797, essv5644335, essv5636673, essv6070621, essv6236865, essv6047982, essv5718959, essv6537893, essv5562127, essv6019970, essv5980517, essv6268147, essv6024952, essv6500877, essv5507077, essv6567032, essv6332834, essv5643383, essv6083473, essv6396023, essv6227690, essv5901576, essv6332172, essv5402367, essv6119477, essv6088788, essv5398404, essv5594337, essv5565680, essv5925869, essv5496545, essv6133883, essv6394005, essv6216125, essv5465895, essv5919165, essv6506318, essv6259947, essv5817065, essv6017515, essv6012671, essv6251377, essv5399647, essv6520861, essv6257809, essv6158136, essv5556480, essv5830503, essv5784891, essv6451982, essv6467973, essv6313256, essv5574605, essv5829362, essv6389019, essv5940195, essv6305420, essv6359491, essv6346419, essv5746256, essv5464876, essv6427460, essv6312271, essv6240578, essv5679705, essv5495420, essv5413332, essv5722683, essv5589234, essv5434569, essv6522843, essv6357401, essv6027988, essv6071269, essv5854165, essv6144969, essv5709885, essv6047607, essv5579943, essv5827195, essv5512254, essv5605505, essv6079652, essv6061721, essv6142888, essv6095174, essv6456017, essv6288380, essv6023387, essv6292477, essv5910348, essv5850654, essv6570519, essv6412945, essv6070739, essv5667545, essv6121972, essv6082080, essv5700913, essv5822476, essv5825119, essv5847030, essv6099046, essv5621836, essv5558109, essv6539407, essv5568247, essv6293338, essv5879475, essv6349811, essv5537971, essv5854197, essv6528860, essv6440297, essv5874957, essv5515179, essv6040824, essv5494052, essv6414895, essv6088545, essv5895760, essv6459743, essv6242597, essv5978485, essv6505337, essv6145296, essv5782000, essv6305476, essv6014772, essv5829446, essv6336045, essv5678033, essv6283777, essv5447942, essv5775761, essv5515657, essv6346133, essv5911421, essv5714623, essv5650632, essv5851651, essv5550167, essv6137319, essv6051028, essv5416567, essv5713728, essv6019177, essv5717592, essv5642726, essv6586010, essv6527083, essv5419815, essv6557046, essv6409340, essv5960786, essv5932676, essv5768641, essv5552390, essv5455094, essv5673755, essv6573941, essv6181011, essv5404984, essv5565223, essv5528144, essv6466692, essv6460026, essv5936995, essv5855524, essv5598074, essv6467620, essv6355033, essv6276453, essv5870671, essv5416773, essv5948338, essv5823363, essv5993906, essv5568104, essv5473299, essv6317159, essv5815491, essv6464415, essv6287925, essv5848998, essv5763703, essv5641457, essv5631018, essv6071874, essv6413019, essv5560741, essv5767265, essv6414433, essv6279266, essv6424554, essv5689849, essv5942292, essv5878332, essv5752467, essv6145600, essv5626847, essv5939040, essv6443714, essv6082268, essv6501417, essv5702390, essv5581524, essv6513256, essv6517799, essv6337961, essv6151689, essv5799839, essv6118477, essv5972590, essv6512489, essv5646618, essv6352421, essv6097902, essv5983527, essv5850162, essv6295284, essv5541400, essv5676745, essv5542021, essv5548499, essv5713100, essv6178351, essv6422553, essv5658808, essv5500882, essv6452811, essv6383828, essv6576053, essv5762493, essv5489586, essv6301645, essv5604692, essv5790770, essv6383235, essv5537622, essv6527944, essv6336961, essv6381561, essv5876650, essv5746571, essv6442866, essv6183791, essv5990052, essv5731885, essv5630930, essv6276656, essv5498312, essv6155348, essv5446602, essv5674779, essv5503844, essv5425834, essv6420128, essv5924512, essv5537475, essv6312225, essv5935091, essv5811346, essv5527224, essv6519733, essv6211421, essv5927732, essv5561424, essv6135663, essv5865614, essv6083289, essv5962657, essv5400569, essv5462255, essv6325632, essv5659847, essv5496633, essv6591875, essv5737546, essv6479517, essv5957188, essv6212672, essv5434859, essv5956464, essv6118669, essv5940486, essv6448237, essv5998539, essv5721214, essv5416500, essv5775177, essv5832703, essv5655731, essv6436096, essv5858715, essv5597606, essv6061334, essv5932934, essv6288462, essv5635247, essv6423396, essv6158564, essv5760175, essv5878822, essv5772303, essv6528466, essv6187499, essv5705947, essv5683567, essv6531885, essv6442447, essv5878925, essv6061547, essv6438516, essv5939214, essv6434386, essv6579012, essv6322533, essv5622985, essv5404438, essv5824074, essv5692560, essv6230238, essv6585500, essv5784558, essv5794045, essv6517831, essv5938432, essv5772247, essv5994196, essv6230284, essv5724164, essv6359331, essv6572900, essv5450252, essv6030538, essv5412944, essv5422940, essv5712431, essv5915592, essv5908788, essv6464045, essv5753831, essv6355625, essv6349281, essv5617664, essv5900827, essv5812267, essv5559034, essv5909133, essv6066176, essv5836662, essv6398708, essv6509124, essv5778399, essv5900874, essv5421445, essv6260595, essv6002497, essv5538639, essv5757062, essv6316676, essv5422606, essv5743507, essv5723784, essv5711910, essv5667197, essv5554772, essv6014447, essv6499273, essv6517777, essv6317791, essv5538649, essv6305717, essv6117115, essv5455051, essv5667119, essv6220012, essv5849153, essv5463500, essv6145231, essv5938978, essv6298541, essv6195852, essv5699209, essv5686358, essv6300317, essv5450875, essv5483498, essv6490214, essv5521292, essv6206358, essv5558336, essv5878619, essv5489767, essv6311380, essv5428556, essv6222423, essv6380807, essv5500136, essv5666397, essv5418813, essv5677255, essv6396796, essv6026583, essv6490837, essv6073094, essv5506473, essv6549383, essv5878130, essv6575499, essv5845499, essv6584602, essv5914024, essv6515512, essv5935018, essv6205931, essv6525692, essv5711815, essv5640464, essv5877943, essv6550110, essv5903421, essv5673390, essv5450231, essv6471570, essv5949959, essv5441545, essv5631082, essv6437558, essv5766814, essv5677338, essv5997803, essv6048703, essv5880024, essv5872031, essv5519730, essv6159363, essv6373435, essv5903701, essv5610020, essv6153394, essv5618699, essv6310830, essv5564549, essv5860387, essv5660403, essv6156919, essv5468460, essv5699351, essv5847623, essv5476486, essv5808240, essv5575010, essv5599760, essv6570468, essv5530664, essv6372609, essv6341224, essv6236117, essv5838268, essv6076641, essv5421451, essv6212715, essv5452678, essv5628498, essv6105280, essv5591297, essv5535296, essv6107585, essv6075137, essv5865070, essv6479799, essv5463574, essv5696746, essv6575255, essv6314012, essv5673683, essv5506411, essv5924980, essv5477493, essv5691733, essv5595522, essv5788296, essv6544854, essv6123002, essv6181485, essv6067567, essv5981056, essv5708849
SamplesHG00189, HG00650, HG00442, HG00608, NA18621, NA18947, NA19664, NA12414, NA11920, NA11931, NA18999, NA18504, NA19684, NA19377, NA18530, NA19920, NA18633, HG00337, NA12813, HG00138, NA19171, HG01350, NA19379, HG00589, NA20798, NA19678, NA20795, NA18558, NA18547, HG01492, NA18960, NA18618, NA18916, NA18574, NA18582, NA20768, HG01083, HG01365, NA19384, HG00537, NA20291, NA19079, NA18949, HG00512, HG00281, HG00139, NA19720, NA18868, NA19238, NA19172, NA19239, NA18985, HG00323, NA20515, NA19789, HG00137, NA18951, NA18605, NA12489, NA20800, NA18538, NA19070, NA19056, NA12878, NA19717, NA19663, HG00344, NA19081, NA18572, NA18948, NA18981, HG00692, NA19064, NA18548, NA18907, NA18537, HG01102, HG00690, HG00404, NA12829, HG00331, NA18532, HG01334, NA19452, HG00463, NA12778, NA19625, NA18593, HG01107, NA19729, HG00611, NA19652, NA19440, NA18533, HG00336, NA18517, NA18564, NA18628, HG00580, NA19331, HG01174, NA19428, NA18943, NA19360, HG00662, NA18615, NA12347, HG00614, HG00513, HG00478, NA19785, HG00267, HG00112, NA19770, HG00595, NA18989, NA19129, HG00628, NA18624, NA19065, NA18612, NA19074, HG01437, HG00581, NA18577, HG00626, HG01060, HG01441, NA19700, HG00592, NA19055, NA18592, HG01359, NA18980, HG01079, NA18561, NA19704, NA18507, HG01188, NA18599, HG01389, HG01374, NA18603, NA12045, HG00699, NA19819, NA12004, NA12058, NA20346, NA20507, NA19190, NA19098, NA18526, NA19068, HG01250, NA19746, NA19660, HG00251, NA18489, NA19728, NA18595, HG00702, HG00689, NA19723, NA18635, HG00330, NA20769, HG00634, NA19131, NA18942, HG00736, HG00610, NA12287, NA19054, NA18498, NA19681, HG00590, NA20541, NA12761, HG01134, HG00277, NA19651, HG00683, HG01170, HG00236, HG00262, NA20340, NA19371, NA18560, NA18617, NA19471, HG01176, NA19087, NA19159, HG00182, NA19725, HG00338, HG00178, NA18973, HG00530, HG00419, NA18638, HG00464, HG00108, NA19007, HG00543, HG01136, HG00560, NA18613, HG00629, NA19657, HG00183, NA19082, NA19707, NA20524, NA12342, HG00428, NA19347, NA19391, NA18991, HG00475, HG00584, HG00500, NA19788, NA18910, NA18976, NA19776, NA19655, HG00373, HG01197, HG01383, NA12892, HG01182, NA18853, NA19756, NA19160, NA18536, NA18576, NA19685, NA19401, HG00476, NA20801, NA11881, NA19834, NA18952, NA18543, NA18559, NA19749, HG00565, NA18950, NA19732, HG01253, HG00136, HG00638, HG00607, NA19786, HG00319, HG00256, HG00125, NA19759, NA19376, HG00672, HG00578, NA19438, HG00329, NA18987, HG00174, NA12830, NA20807, NA19726, NA18972, HG00343, NA18552, HG01377, NA18984, HG00472, NA19004, HG01097, NA18549, HG01191, HG00437, NA19153, NA20509, NA19394, NA19701, HG00542, NA12717, HG01173, NA12842, HG00143, HG01462, HG00671, NA18861, NA18508, NA10851, HG00559, NA18565, HG00315, NA19350, HG00181, NA19359, NA18959, HG00737, HG00115, HG00449, HG00654, HG01051, HG00261, NA18602, HG00693, NA18627, HG00271, HG00663, NA20814, NA07346, NA18563, HG00641, NA19373, NA18940, NA18519, HG01351, HG01168, NA18567, NA07347, NA19457, NA18571, NA20287, NA11930, NA12275, HG01069, HG01080, HG00325, NA11932, NA11994, HG00534, NA19207, HG00705, NA19722, NA18990, HG01198, NA18557, HG01048, HG01133, NA18539, HG01124, HG00154, HG00443, HG00268, HG01171, NA19670, NA19403, HG00557, HG00245, HG00556, HG00583, HG00275, NA18579, HG01149, NA18534, HG00740, NA19654, HG00324, HG00284, NA18573, NA11919, HG00651, HG00250, HG00531, HG00479, HG00684, NA18912, HG01101, NA18553, NA19761, NA18555, HG00146, HG00704, NA19469, HG00246, NA18570, NA18858, HG01075, NA19012, NA18974, NA12043, NA18953, NA19003, NA18632, HG00155, NA19390, NA19147, HG00625, NA20276, HG00353, NA19072, HG00734, NA20530, HG01375, NA19835, HG00473, NA19311, HG01113, NA20544, HG01137, NA19783, HG00418, NA18610, HG01489, HG00620, NA18501, HG00342, NA19716, NA19093, NA18636, NA19780, NA19711, NA19900, NA18983, NA19430, NA19316, HG01125, NA18968, NA12890, NA19463, NA12154, NA20754, NA19676, NA11830, HG01098, HG01356, HG00536, HG00524, HG00187, HG00640, HG00318, NA18486, HG01465, NA18545, NA19777, NA19057, NA18596, NA18606, NA18870, NA07357, HG01140, NA18967, HG00127, NA19381, NA19005, NA18944, HG01366, HG01070, NA19201, HG00501, NA19382, NA19762, HG01488, HG00448, NA19119, NA18982, NA11992, NA12283, HG00369, NA19782, NA18611, HG01067, NA18874, NA06984, NA19137, HG01072, NA19731, NA19385, HG00422, NA19317, NA18986, HG00309, HG00427, NA20811, NA19901, HG00159, NA19445, NA18975, NA19200, NA11993, HG00260, NA18614, NA10847, HG01353, HG00313, HG01183, NA18544, NA19210, HG01187, HG00596, HG00328, NA12003, NA19152, NA18956, HG00701, HG00436, HG00533, NA18637, NA18630, HG00619, HG00708, HG00635, HG01390, NA18566, HG01073, NA19114, NA19774, NA11894, NA18856, NA12249, HG00613, HG00525, HG00321, HG00157, NA12827, NA19257, HG00276, NA18634, NA19675, NA18945, HG01204, NA18546, NA18608, NA20522, NA18542, NA12716, HG00285, NA19321, NA18961, NA19473, NA18941, NA19240, HG00278, NA19773, NA19380, NA19144, NA19398, NA18971, HG00421, HG00656, HG01055, HG00123, HG00698, HG00131, HG01251, NA19661, HG01082, NA19758, NA18511, NA07000, NA18522, HG00554, HG00180, NA18622, HG01061, NA18562, NA12776, NA18965
Known GenesTJP2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2661677
Frequency
Sample Size1151
Observed Gain0
Observed Loss562
Observed Complex0
Frequencyn/a


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