A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2661235



Internal ID9580654
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:158757135..158758219hg38UCSC Ensembl
chr1:158726925..158728009hg19UCSC Ensembl
Cytoband1q23.1
Allele length
AssemblyAllele length
hg381085
hg191085
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv73e199
Supporting Variantsessv5961111, essv6022266, essv5933930, essv5869301, essv6511580, essv5562539, essv5673458, essv5560687, essv6300414, essv6077872, essv6046869, essv6222066, essv5514900, essv6062398, essv6531264, essv6534230, essv5634348, essv6469680, essv5942038, essv5441839, essv6303812, essv6030751, essv6421710, essv6449908, essv5720652, essv6210170, essv5769506, essv6098182, essv6232970, essv6124435, essv6483449, essv5649494, essv6274423, essv6215797, essv5524381, essv6049574, essv5976128, essv5901210, essv6576260, essv5644528, essv6396946, essv5510216, essv6077525, essv6400962, essv5858280, essv6241460, essv5778993, essv6521236, essv5507748, essv5422741, essv6160522, essv6161288, essv5886394, essv6551807, essv6045167, essv6537820, essv6417639, essv5902113, essv5513712, essv6283383, essv5929602, essv5531031, essv6255726, essv5593829, essv5497273, essv5494792, essv5713252, essv5416483, essv5632016, essv6086913, essv6095475, essv6444804, essv6342793, essv5807519, essv5968679, essv5752113, essv5599588, essv6156762, essv6522700, essv6405443, essv6191803, essv5488367, essv5865148, essv5652498, essv5899412, essv5429616, essv5646414, essv5857313, essv5814626, essv5606506, essv6116047, essv5457905, essv6513385, essv6504824, essv5697981, essv6590775, essv6327767, essv6101934, essv6479351, essv5456944, essv5792449, essv5663972, essv6138573, essv5708990, essv6216170, essv5909971, essv5860579, essv5867258, essv6148231, essv6546016, essv6140628, essv6040263, essv6157819, essv5888144, essv6573630, essv5782070, essv5773601, essv6593695, essv5972769, essv5402213, essv5538333, essv5976779, essv5831395, essv5752371, essv5575179, essv5884745, essv6228060, essv5762276, essv5432195, essv5688311, essv5655130, essv6133015, essv6090767, essv5845622, essv5960224, essv5775230, essv6199680, essv5621282, essv6150987, essv5931870, essv5710524, essv5681925, essv6370088, essv6012564, essv5968227, essv5557853, essv6546743, essv6597931, essv5593609, essv5851612, essv6321497, essv6512703, essv6409091, essv6308206, essv5557963, essv6410649, essv5814968, essv6415832, essv6005981, essv5775982, essv6388795, essv6363094, essv6076709, essv5612366, essv6545581, essv5610813
SamplesHG00626, HG00542, NA19058, NA20543, HG00536, HG00231, HG00608, NA19909, NA12286, NA11829, HG00671, HG00361, NA10851, NA19704, HG01389, NA18999, HG00244, NA18486, NA12004, NA18606, HG00737, NA19190, NA18602, NA18627, HG00327, HG00663, NA20537, NA07346, NA20589, NA18595, HG00702, HG00689, HG00448, HG01168, NA18635, HG00330, NA19062, HG00537, NA18611, NA12275, HG01069, HG00120, HG00683, HG00106, NA06984, NA20812, NA20340, HG00534, HG00422, HG00705, HG00182, HG00427, NA18990, NA18557, NA18867, HG00530, HG00419, HG00253, HG01353, HG00133, HG01183, HG01136, HG00188, HG00154, NA18544, HG00560, HG00443, HG00268, HG00266, HG00183, NA19070, NA19056, HG00596, HG01384, NA12003, HG00428, NA19462, NA20809, HG00653, HG00577, NA20521, HG00701, HG00475, NA19236, HG00556, HG00320, HG00533, HG00344, HG00275, NA18534, NA20770, HG00619, HG00635, HG01390, HG01047, NA18566, HG01102, HG00273, NA19084, HG00690, HG00373, HG00479, NA20581, HG00684, HG01383, HG00117, HG00321, HG00140, NA18553, NA12827, HG01334, HG00152, NA18963, HG00704, NA20828, NA18536, NA12778, HG00246, HG00126, NA18634, NA20534, NA18576, NA18953, HG00155, HG01190, HG00285, NA19834, HG00357, NA12272, NA20804, HG01357, HG01174, HG01375, HG00473, NA20792, HG00237, HG00319, NA20797, HG00256, NA12763, HG00662, HG00418, NA18615, NA18610, HG01489, NA12347, HG00125, NA19078, HG00672, HG00513, HG00578, HG00259, HG00656, HG01055, HG00186, HG00112, HG00698, NA18552, HG00377, NA20503, HG00472, HG01125, NA18624, NA19463, NA18623, NA20509
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2661235
Frequency
Sample Size1151
Observed Gain0
Observed Loss166
Observed Complex0
Frequencyn/a


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