A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2661196



Internal ID9927301
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:107256285..107258391hg38UCSC Ensembl
Outerchr9:107255914..107258761hg38UCSC Ensembl
Innerchr9:110018566..110020672hg19UCSC Ensembl
Outerchr9:110018195..110021042hg19UCSC Ensembl
Cytoband9q31.2
Allele length
AssemblyAllele length
hg382848
hg192848
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6440845, essv6348312, essv6402392, essv5813345, essv5562072, essv5499334, essv6491836, essv5728361, essv5996227, essv5803589, essv5415321, essv5600862, essv6432525, essv6395327, essv5816514, essv5870067, essv6183594, essv5733719, essv5741518, essv5911820, essv5524508, essv6327377, essv5649606, essv5808117, essv6160583, essv6375304, essv5636204, essv6594401, essv5774091, essv5844870, essv6243749, essv6210166, essv5536408, essv5895380, essv5656143, essv6168385, essv6160839, essv5918645, essv6490694, essv5987611, essv5846356, essv5835747, essv5474660, essv5936606, essv6073337, essv5893539, essv6351378, essv5672321, essv5451141, essv6496109, essv5531588, essv6564967, essv6445184, essv5910323, essv6257213, essv5427612, essv5438215, essv6255315, essv6204504, essv6171283, essv6215733, essv6307974, essv6107599, essv6139984, essv6225641, essv6138263, essv5740796, essv6193438, essv5910171, essv5825487, essv5820772, essv6523172, essv5517189, essv6196526, essv5785810, essv5947029, essv5988063, essv6359652, essv5648315, essv6501363, essv6466057, essv6064811, essv6044703, essv6397273, essv5604925, essv5617625, essv6393750, essv6016833, essv6259488, essv5762929, essv5899035, essv5716552, essv5706649, essv5784974, essv6262246, essv5545326, essv6081882, essv6529492, essv6371822, essv6359047, essv6138239, essv6225474, essv6113865, essv5683922, essv5443093, essv5975435, essv6443565, essv5549610, essv6280720, essv5570969, essv6593294, essv6234170, essv6269992, essv5908953, essv5780104, essv5673580, essv6217523, essv6406332, essv6035908, essv5433409, essv6591100, essv6503243, essv5433118, essv6515178, essv6289655, essv5731552, essv6581395, essv6164824, essv6155419, essv5843659, essv6036955, essv6431141, essv6406515, essv5756759, essv6172177, essv6012284, essv5730626, essv5690476, essv5631695, essv6233164, essv6071770, essv6474066, essv5884141, essv6578836, essv6174189, essv5816072, essv6483379, essv6369860, essv6574145, essv5678144, essv6470637, essv5620089, essv6046346, essv6181230, essv6567878, essv6528460, essv6082509, essv5897219, essv6313407, essv5701552, essv5666935, essv6268484, essv6210415, essv5766757, essv6098562, essv6195015, essv5948261, essv5468659, essv6233419, essv5744266, essv5397882, essv5533045, essv5848837, essv5536436, essv6225069, essv6369645, essv6562940, essv5675668, essv5596587, essv6179729, essv5782915, essv5911238, essv6229546, essv6038704, essv5405958, essv6150309, essv6381435, essv6354144, essv6081456, essv5657339, essv6022099, essv5629245, essv5743676, essv5599207, essv5397766, essv6350347, essv6054028, essv6461058, essv6316438, essv5809609, essv6211476, essv5519799, essv5431570, essv6368365, essv6506086, essv5964438, essv5877641, essv5537368, essv6383070, essv5969755, essv5634881, essv6508090, essv5759837, essv5931173, essv6177780, essv5498836, essv5565428, essv5702141, essv5840665, essv5674992, essv5904810, essv5886606, essv6105360, essv5621882, essv5507795, essv6256032, essv5464521, essv6212878, essv6518407, essv6250615, essv5515165, essv6528919, essv6448377, essv6110527, essv5783769, essv6118169, essv5836933, essv5546214, essv6449044, essv6137186, essv5578228, essv5814644, essv6232549, essv5417117, essv6223474, essv5946325, essv5488883, essv6476531, essv5559564, essv6313622, essv6163154, essv6574029, essv6220944, essv5959766, essv6511663, essv5941861, essv6244840, essv5398991, essv5540553, essv6494405, essv6330719, essv6050563, essv6480855, essv5652314, essv6215657, essv5420581, essv6273361, essv6014499, essv5572065, essv6276840, essv6057582, essv6003239, essv6207902, essv5853708, essv5848539, essv5720291, essv5437144, essv5527537, essv5489684, essv6321851, essv5770991, essv5466581, essv6485002, essv6080665, essv6458580, essv6249409, essv6087903, essv6414136, essv5553653, essv6370746, essv5432569, essv6133023, essv5753980, essv6284385, essv5726119, essv6340368, essv5737593, essv6564671, essv5532945, essv5475370, essv6019585, essv5742777, essv6524846, essv5881996, essv5590443, essv5415932, essv6391151, essv6291912, essv6165637, essv6417430, essv6076798, essv5616187, essv6321640, essv5466928, essv6146810, essv5481940, essv5479860, essv5793317, essv5632565, essv6383532, essv6273145, essv6139190, essv5933823, essv5769236, essv5554038, essv5767765, essv6340775, essv6560619, essv6167901, essv6173442, essv5581474, essv5901072, essv5494143, essv5491218, essv5623691, essv6292709, essv6098600, essv5988241, essv5676144, essv6110597, essv5782907, essv6502159, essv5897473, essv5612087, essv6484253, essv5997890, essv5726834, essv6230946, essv5907059, essv6176859, essv6581213, essv6243266, essv6239807, essv5715642, essv6533900, essv6533612, essv5985046, essv5447629, essv5455674, essv5946437, essv5445818, essv5643478, essv5691962, essv6588773, essv5626584, essv6581688, essv6214311, essv6118238, essv6587171, essv5559270
SamplesNA20509, NA20588, NA19394, NA18502, HG00189, NA12717, HG00442, HG00143, NA19703, NA18621, NA18947, NA12286, HG00671, HG00242, NA10851, HG00559, NA19399, NA20514, NA11920, HG00257, HG01066, HG00315, HG00151, NA20816, NA20802, NA19359, NA12340, NA20332, NA19684, NA19377, NA18530, NA18959, HG01518, NA20517, HG01461, NA19443, HG01051, NA19920, NA18633, HG00261, NA12750, HG00693, HG00337, HG00271, NA19107, NA07346, NA18940, NA18519, HG00589, HG00122, NA18597, NA20589, HG01351, HG01167, HG01168, NA18923, NA20756, NA19062, NA18916, NA11918, NA07347, NA18582, HG01365, NA20287, HG00537, HG00243, HG00281, NA12275, NA20518, HG00156, NA18868, HG00325, NA11932, HG00232, NA19372, NA12044, NA19172, NA19722, HG00160, HG01198, NA19239, NA18557, NA18985, HG00326, HG00323, NA18867, NA19789, NA18539, NA19921, NA20753, HG00137, NA12777, NA18605, NA19908, HG00731, NA20800, HG00268, HG01171, HG00282, NA19070, NA19056, NA19403, HG00557, HG00245, HG00657, NA19717, NA19081, NA12718, NA20519, NA18871, NA18572, HG00551, HG00692, HG00740, NA18537, HG01102, NA11919, HG00250, HG00684, NA18532, HG00140, NA19099, NA19761, NA19009, HG00152, NA19452, NA18963, HG00704, NA19682, HG00463, NA19469, HG00246, NA19395, NA18570, NA19625, NA12546, HG01107, HG01075, NA12043, NA18953, NA19375, NA19729, NA18632, NA19652, NA18564, NA19747, HG01357, NA20530, NA19835, NA20792, HG00237, HG00116, NA19360, NA19783, NA12763, HG00662, NA18610, HG01342, HG00339, NA19779, HG00342, HG00267, NA19093, NA20510, HG00310, NA20786, NA19102, NA18873, HG00112, HG00280, HG00377, HG00274, NA20502, NA19430, NA11892, NA19316, NA19312, HG00628, HG00171, NA18623, NA20585, NA12154, NA19429, NA19346, NA18487, HG01516, HG00593, HG00096, HG01060, HG01441, NA19648, NA19700, NA19055, HG00231, NA19397, NA11995, HG00361, HG01359, NA19914, HG01052, NA19332, NA19704, HG01188, HG00306, NA18917, HG00640, NA18486, HG01465, NA12004, NA12058, NA20346, HG00177, NA20507, NA19190, NA18870, NA12155, NA07357, HG01140, NA19374, NA19068, HG01250, NA19396, HG00127, NA18550, HG01070, HG00251, NA18489, NA19762, NA19448, NA18595, HG00702, HG00689, NA20586, NA18982, NA19198, NA20317, NA12348, HG00736, NA19649, NA11992, HG01354, NA19313, NA19088, HG00247, HG00369, HG00270, NA18498, NA20513, NA19681, NA18964, NA19404, NA12282, HG00277, HG01455, HG00120, NA19383, HG00683, HG00106, NA06984, HG01170, HG01072, NA18560, NA19075, NA18617, NA19317, NA19087, HG00309, HG00182, NA19901, NA19725, NA19189, NA18520, HG00637, HG00178, NA18908, NA18973, HG00419, HG00464, NA11831, HG01353, HG00133, NA18613, NA19657, NA19437, NA19082, HG01187, HG00145, NA20524, HG01384, HG00328, NA12003, HG00428, NA19462, HG00653, NA19391, NA19236, NA18516, HG00320, NA20770, NA19776, HG00708, HG01073, HG00273, NA20299, NA19774, NA19449, NA19655, NA18499, NA11894, NA20538, NA18856, HG00117, HG00613, NA18853, NA19257, HG00276, HG00141, NA18634, HG01204, NA18576, NA20765, NA18546, NA18608, NA20522, NA18542, NA12716, NA18961, NA19749, HG00565, NA18950, HG00375, HG00357, NA18941, NA20804, NA19240, NA19334, NA19467, HG00319, NA06986, HG00269, HG00125, NA19759, NA19398, NA20348, NA19248, HG01491, HG00312, HG00421, HG00329, NA12749, HG00656, NA20334, HG00174, HG00123, NA20807, NA19726, HG00343, NA20528, HG01377, HG00472, NA19004, NA18488, HG01082, NA18522, HG01097, HG00554, NA18549, HG01061, HG00437, NA12776
Known Genes
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2661196
Frequency
Sample Size1151
Observed Gain0
Observed Loss370
Observed Complex0
Frequencyn/a


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