Variant Details

Variant: esv2661063

Internal ID

9580482

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr5:150062175..150062600	hg38	UCSC Ensembl
	chr5:149441738..149442163	hg19	UCSC Ensembl

Cytoband

5q32

Allele length

Assembly	Allele length
hg38	426
hg19	426

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6141940, essv5423442, essv6488186, essv5532273, essv5534272, essv6220169, essv6122809, essv5524904, essv5712696, essv5479337, essv6040622, essv5433364, essv5927733, essv5749160, essv5463380, essv6493375, essv5524458, essv6001212, essv6473371, essv5430715, essv5430427, essv6344600, essv5528409, essv6284916, essv6192638, essv5971070, essv6321846, essv5867004, essv6472837, essv6320676, essv5537464, essv5793004, essv6401034, essv5445130, essv6474312, essv5602701, essv5871145, essv6482415, essv6040002, essv5996831, essv5908727, essv5906415, essv6469943, essv6232754, essv5903949, essv5531739, essv5594332, essv6488222, essv6108473, essv5977989, essv5858859, essv6556666, essv5491653, essv6592476, essv5572458, essv6500379, essv6286696, essv5590575, essv5577664, essv6086532, essv6435531, essv6016998, essv5870041, essv6352174, essv5909823, essv6555986, essv5838785, essv5769147, essv5723476, essv5658836, essv5928358, essv6227368, essv6015807, essv6148335, essv6007718, essv6197407, essv5424728, essv6079364, essv5727234, essv5747982, essv6286809, essv5857070, essv5815554, essv5899269, essv6431672, essv6553354, essv6255421, essv5716323, essv5480461, essv5878842, essv6168174, essv5646997, essv5511173, essv6188701, essv6136848, essv5803110, essv6538863, essv6497885, essv5645314, essv6304344, essv6183432, essv5544191, essv6209308, essv6039110, essv6275300, essv5904407, essv5737706, essv6116736, essv5578428, essv5908937, essv5432589, essv5840898, essv5964395, essv6565081, essv6587208, essv6209756, essv6101527, essv5601477, essv6130865, essv6544414, essv6326531, essv5913316, essv6098942, essv6156643, essv6140446, essv6572207, essv6241510, essv5915808, essv6124606, essv5979396, essv5954103, essv6528234, essv6500358, essv6422357, essv6166451, essv5433539, essv6541947, essv5913827, essv6104388, essv5839106, essv5578740, essv6379182, essv5701844, essv5754819, essv5528216, essv5450920, essv6539312, essv6394142, essv6031718, essv5692654, essv6241136, essv5678494, essv6454383, essv5678343, essv5883512, essv6177193, essv5764867, essv5681706, essv6207774, essv5675941, essv6100423, essv5519361, essv5565677, essv5439426, essv6450368, essv6355750, essv5697159, essv6288651, essv6357239, essv5851144, essv5790207, essv6130112, essv5437420, essv6467322, essv5849050, essv6258918, essv5623601, essv6062241, essv5456374, essv6435930, essv5714974, essv5549914, essv6302412, essv6002667, essv5944202, essv6075908, essv5451183, essv6488024, essv5853533, essv6556924, essv5771299, essv5470490, essv6289911, essv5397382, essv6041094, essv5620087, essv6507273, essv5892083, essv5761775, essv5472981, essv5545512, essv5445348, essv5508725, essv6281861, essv6168722, essv5851337, essv5649854, essv5583970, essv6020113, essv5999133, essv6414777, essv6360543, essv5792371, essv5977484, essv5962029, essv5569983

Samples

NA18522, NA19429, NA18622, HG01437, HG01061, HG00553, NA19153, NA12776, NA18620, HG00593, NA20588, HG00114, NA19701, NA20761, HG01441, HG00650, NA19648, NA19700, HG00536, NA19909, NA18621, HG00249, NA19664, HG00242, NA19204, NA18592, HG01359, HG00524, NA19914, HG01052, NA18507, NA11920, NA20531, HG00257, HG01389, HG01066, HG00233, NA20802, NA19350, NA18486, NA12751, HG01465, HG00179, HG01461, NA19098, NA19920, HG00337, HG00271, NA12813, HG00663, NA19068, NA19746, NA19660, NA19381, NA19373, HG01350, NA19379, NA18550, NA18519, NA19201, HG00501, NA19382, NA19762, HG01177, HG00702, HG00448, NA19723, NA18635, NA18619, HG00330, NA18547, HG01492, NA18618, HG00610, NA07048, NA11918, NA07347, NA19457, NA19313, NA19138, NA20513, NA19681, HG00185, NA18964, NA19079, NA20541, HG00512, HG00139, NA12282, NA19720, HG01080, HG01067, HG00335, NA12156, HG00325, NA19137, NA11932, NA19238, NA12044, NA11994, NA12889, NA19159, NA19725, NA18520, HG01198, NA20127, NA19985, HG00530, NA20755, HG00464, HG01124, NA10847, NA18951, HG00560, NA20800, NA19082, NA20787, NA19670, HG00557, NA12342, NA19152, NA20809, HG00577, HG00657, NA19391, NA19717, NA19663, HG00584, HG01498, HG00500, HG00263, NA19788, NA18579, NA19658, NA18871, NA19776, HG00692, HG01390, HG01047, NA20525, NA19654, HG01094, HG01073, NA18573, HG00651, NA20299, NA19000, NA19084, NA12829, NA11894, NA20538, HG01383, NA18912, HG00117, HG00140, NA12827, NA19257, HG00152, NA19452, NA19469, NA18536, NA12778, NA12546, NA19012, NA20765, NA18608, NA19685, HG00611, HG00476, HG00124, NA19652, NA18542, NA12716, HG00285, NA19321, NA18961, NA19256, HG00580, HG00357, HG01551, NA20520, NA19773, NA19380, NA07051, NA20785, NA20790, HG01375, NA19679, NA20504, HG01113, NA20544, NA20516, NA20797, NA07037, NA19783, NA19085, NA18615, HG01489, HG01342, HG00707, HG00111, HG01491, NA19438, NA19713, NA19102, NA18873, NA20807, HG00131, NA19726, NA19213, HG00252, HG00595, NA19755, HG01111, NA19758, NA19312

Known Genes

CSF1R

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2661063

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	216
Observed Complex	0
Frequency	n/a