A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2661063



Internal ID2894150
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:150062175..150062600hg38UCSC Ensembl
chr5:149441738..149442163hg19UCSC Ensembl
Cytoband5q32
Allele length
AssemblyAllele length
hg38426
hg19426
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5793004, essv5840898, essv6450368, essv5531739, essv6488186, essv5838785, essv5962029, essv5565677, essv6101527, essv6284916, essv6031718, essv5906415, essv5944202, essv6302412, essv6472837, essv5423442, essv6079364, essv5871145, essv5537464, essv5577664, essv5578740, essv5851337, essv6592476, essv5508725, essv6108473, essv6122809, essv6587208, essv6321846, essv6286696, essv5544191, essv5578428, essv5849050, essv5549914, essv6227368, essv5519361, essv6401034, essv5545512, essv6075908, essv6556924, essv5646997, essv6538863, essv5892083, essv6467322, essv6255421, essv6062241, essv5675941, essv5470490, essv6241136, essv6435531, essv6473371, essv5511173, essv6344600, essv6469943, essv5463380, essv6360543, essv5999133, essv5692654, essv6454383, essv5583970, essv6555986, essv6156643, essv6002667, essv6556666, essv5723476, essv6192638, essv6104388, essv5764867, essv5430715, essv5716323, essv6431672, essv6281861, essv5714974, essv6352174, essv5858859, essv6289911, essv6124606, essv6188701, essv6140446, essv6148335, essv6528234, essv6168174, essv6040002, essv5908937, essv5479337, essv6541947, essv5569983, essv5749160, essv6098942, essv6007718, essv6039110, essv6209756, essv6207774, essv5534272, essv5977484, essv5480461, essv6258918, essv5971070, essv6141940, essv6565081, essv5450920, essv5678343, essv6544414, essv5915808, essv6326531, essv5867004, essv6136848, essv6016998, essv5445130, essv5620087, essv5472981, essv5397382, essv5815554, essv5979396, essv5701844, essv5594332, essv6286809, essv6553354, essv6488222, essv5790207, essv6493375, essv5747982, essv6166451, essv5878842, essv5883512, essv5645314, essv5899269, essv5913827, essv5954103, essv6507273, essv6130865, essv6220169, essv5870041, essv5430427, essv5433364, essv5803110, essv5904407, essv5857070, essv5649854, essv6355750, essv5727234, essv5601477, essv5524458, essv5623601, essv5737706, essv5445348, essv6275300, essv5977989, essv5681706, essv6320676, essv6241510, essv5851144, essv6100423, essv6500358, essv6500379, essv6497885, essv5771299, essv6177193, essv6020113, essv6232754, essv6116736, essv6414777, essv5678494, essv5913316, essv6357239, essv5433539, essv6197407, essv5590575, essv5927733, essv5908727, essv5697159, essv5754819, essv5761775, essv6482415, essv5456374, essv6435930, essv6209308, essv6572207, essv6422357, essv5491653, essv6474312, essv5528216, essv5712696, essv6001212, essv5658836, essv6304344, essv5432589, essv5839106, essv6041094, essv5524904, essv5996831, essv6288651, essv5437420, essv5903949, essv6015807, essv5602701, essv6168722, essv5928358, essv5532273, essv5769147, essv6379182, essv5439426, essv5528409, essv6539312, essv6394142, essv6086532, essv5572458, essv5451183, essv5792371, essv5853533, essv5424728, essv6488024, essv5964395, essv6130112, essv6040622, essv6183432, essv5909823
SamplesHG01441, NA19012, NA19137, NA12827, NA18621, NA18964, NA19312, NA19152, HG00152, HG01359, HG00252, HG00536, NA07347, NA20787, HG00257, NA18520, NA07037, NA18951, NA19321, NA20809, NA18871, NA20785, HG01052, NA12342, HG01342, NA20516, HG00500, NA11920, HG00464, HG00131, NA19783, NA20544, NA20531, NA11918, NA19469, NA18550, HG00707, NA20299, NA10847, NA20802, HG01389, NA19670, HG00657, NA12813, HG00117, HG00577, NA19788, HG01492, NA20800, HG01491, NA18573, NA18608, NA19920, NA18542, HG00553, HG01350, HG00139, NA19379, NA18507, NA20588, HG00111, NA12776, NA19685, HG01461, NA07051, NA19648, HG00651, HG00335, HG00557, NA19257, NA19701, NA19084, NA20755, NA12044, HG01551, NA18873, NA19776, NA19438, NA19654, NA19762, NA19726, NA19914, NA20761, HG00242, NA18912, NA19085, HG00179, HG00593, NA12282, HG01375, NA19652, HG00337, NA11994, NA18635, NA19068, NA18536, NA19660, HG00140, NA18622, NA18618, NA20504, HG00610, HG01061, HG00692, HG01047, NA20807, HG01124, NA18592, NA20127, HG00330, NA07048, NA19429, NA20541, NA20765, NA18547, NA19985, NA12829, NA19256, HG01113, NA11894, NA20520, NA19773, NA19658, NA19681, NA19663, NA19679, NA19457, HG00357, NA19700, NA19082, HG00584, HG00114, NA12751, NA19000, NA19213, NA19725, NA19313, NA19380, HG01111, HG01437, NA19153, HG00124, NA12716, NA18620, HG01465, HG00233, HG01066, NA12778, NA19373, HG00325, NA20790, HG00185, NA18486, NA19102, HG00263, NA18522, NA19238, HG00560, NA19713, HG01073, NA19098, NA19664, HG00501, HG00249, NA18961, HG01080, NA19909, NA20797, HG00524, NA19720, HG00512, NA19159, NA19382, HG01383, NA18579, HG01094, NA18619, NA20525, HG00595, NA19138, NA19391, NA19723, NA19201, HG00611, HG00650, HG00663, NA12156, NA12889, HG00580, HG00448, NA19755, HG01390, NA19452, NA20513, HG00530, HG00285, NA19717, NA12546, NA11932, HG01177, HG01498, NA19204, NA19350, HG01489, NA19079, NA19381, NA18615, NA19758, HG00476, NA20538, HG00702, HG00271, NA18519, NA19746, HG01067, HG01198
Known GenesCSF1R
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2661063
Frequency
Sample Size1151
Observed Gain0
Observed Loss216
Observed Complex0
Frequencyn/a


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