A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2660869



Internal ID9926974
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:15272568..15272696hg38UCSC Ensembl
chr3:15314075..15314203hg19UCSC Ensembl
Cytoband3p25.1
Allele length
AssemblyAllele length
hg38129
hg19129
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv852e199
Supporting Variantsessv6183629, essv6515911, essv5731251, essv6094200, essv6280836, essv5796692, essv6250952, essv5490805, essv5523632, essv5898419, essv5824544, essv6432634, essv5801569, essv5682094, essv5456236, essv6000257, essv5647639, essv5571245, essv6235428, essv5530376, essv6595710, essv5713254, essv5542490, essv6355946, essv6323977, essv5950948, essv6494888, essv6059388, essv5652101, essv5628191, essv5540715, essv6289325, essv6370615, essv6238066, essv5896921, essv5883953, essv6488774, essv6409425, essv6553014, essv5997349, essv6476013, essv6205204, essv5665346, essv6328376, essv6324420, essv6548718, essv6036085, essv5939245, essv6068642, essv5948269, essv6593851, essv6048323, essv6045021, essv5409393, essv5613881, essv5472145, essv6332826, essv5988246, essv5905134, essv6438465, essv5511368, essv6200417, essv5803495, essv6054693, essv6106197, essv5985453, essv5421655, essv6056444, essv6211477, essv5434470, essv6490067, essv6440458, essv6202492, essv5575300, essv5871705, essv5975875, essv5404602, essv5787363, essv6244007, essv5784824, essv5671280, essv5573718, essv5847193, essv5637021, essv5491120, essv6414155, essv6180859, essv5577084, essv6255056, essv6175014, essv5651900, essv5635772, essv5670594, essv5558313, essv5641969, essv5602467, essv5559036, essv6501638, essv6489094, essv6060732, essv6306599, essv6380739, essv5658423, essv5930203, essv5765076, essv5420537, essv6546044, essv6376066, essv6282000, essv5873599, essv5546269, essv6235222, essv6136373, essv5662360, essv5553935, essv6415062, essv6369113, essv5602403, essv5492003, essv6155379, essv5512916, essv6251688, essv6044712, essv5616907, essv5938608, essv6126656, essv6279891, essv6069334, essv6201608, essv6031878, essv6506062, essv5612987, essv6429324, essv6002024, essv5805367, essv6231790, essv5752082, essv5457960, essv5409543, essv6236912, essv5730103, essv5765631, essv6302267, essv6288846, essv5453899, essv6194661, essv5528627, essv6523027, essv6501760, essv6318915, essv6284413, essv6180231, essv6525737
SamplesNA19394, NA18502, NA19701, HG01173, HG01356, NA19397, HG00608, NA19466, HG00671, HG00524, NA19399, HG01052, NA19704, NA18917, NA19350, NA19359, NA19092, NA18545, NA19819, NA19057, NA18504, NA18606, HG00654, NA19443, NA18526, NA19920, NA18510, NA19374, NA18563, NA19396, NA19381, NA19373, HG01350, NA19379, NA18519, NA19382, HG00702, NA18923, NA19198, NA12891, NA19916, NA18582, NA19313, HG01083, NA19138, NA19384, NA19130, NA20541, NA19404, HG01134, NA20278, HG00683, NA18874, NA18977, NA19917, NA19238, NA19087, HG00427, NA19189, NA18520, NA19239, HG01048, NA20342, NA19921, NA19451, NA18638, HG01124, HG00313, HG00137, HG01136, HG00282, HG00596, NA19403, HG00557, NA19077, NA12003, NA19462, NA18933, HG00732, HG00701, HG00657, NA19391, NA19236, HG00556, HG00275, NA18910, NA18566, HG01102, HG00324, HG01073, NA18573, NA19114, HG01197, HG00684, NA18856, NA19453, NA12892, NA18532, HG00613, NA18853, NA18555, NA20296, NA18632, HG00476, NA19440, NA19390, NA19834, NA19147, NA18559, NA19712, NA18628, NA19435, NA19331, NA19240, HG00278, NA19380, HG01375, NA19334, NA19428, NA19324, NA19467, NA19360, HG00418, HG00620, NA19398, HG00707, HG00111, NA20348, NA19472, HG00421, HG00656, NA19713, HG01254, NA19093, NA18636, NA18873, NA19116, NA19711, NA19213, NA19900, HG00252, NA18505, NA18488, HG01082, NA19312, HG01125, NA19463, NA18511, NA18612, NA19429, NA19346, NA19074, NA18965
Known GenesSH3BP5
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2660869
Frequency
Sample Size1151
Observed Gain0
Observed Loss153
Observed Complex0
Frequencyn/a


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