Variant Details

Variant: esv2660782

Internal ID

9580201

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr2:104851358..104856164	hg38	UCSC Ensembl
Outer	chr2:104850987..104856534	hg38	UCSC Ensembl
Inner	chr2:105467816..105472622	hg19	UCSC Ensembl
Outer	chr2:105467445..105472992	hg19	UCSC Ensembl

Cytoband

2q12.1

Allele length

Assembly	Allele length
hg38	5548
hg19	5548

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6084738, essv6191806, essv6286887, essv5502696, essv6532647, essv5948720, essv6485826, essv6579691, essv5729851, essv6253104, essv6527486, essv6567199, essv6052025, essv5593341, essv6539645, essv6521500, essv5624743, essv5517526, essv6594293, essv5649130, essv6380110, essv6483880, essv5705724, essv6105087, essv5972581, essv6562461, essv5681224, essv5453297, essv5906693, essv5486416, essv6429160, essv6054257, essv6160387, essv6431834, essv5635331, essv6424471, essv6567085, essv5900929, essv5423895, essv5823627, essv6397724, essv6311323, essv5744643, essv6474412, essv5683948, essv6554440, essv5636038, essv6486886, essv5780457, essv5419886, essv6431937, essv6228058, essv5774105, essv6096402, essv5908321, essv5733544, essv5397140, essv5743914, essv5711505, essv5729155, essv5574540, essv5894672, essv5401837, essv6388264, essv6581876, essv5881079, essv6255934, essv5583973, essv6392463, essv6370800, essv6181032, essv6525352, essv6318485, essv5982812, essv6445783, essv5829571, essv6447484, essv6557112, essv6105141, essv6486621, essv6153861, essv5647719, essv5939759, essv6152614, essv6157064, essv5849492, essv5479752, essv5593654, essv6135081, essv5664318, essv5647890

Samples

HG00613, HG00537, HG00536, HG00607, HG00619, HG00418, HG00705, HG00437, HG00500, HG00464, HG00596, HG00565, HG00449, HG00707, HG00463, HG00657, HG00614, HG00577, HG00428, HG00475, HG00542, HG00701, HG00683, HG00698, HG00581, HG00404, HG00651, HG00557, HG00578, HG00699, HG00479, HG00592, HG00635, HG00543, HG00556, HG00593, HG00472, HG00421, HG00583, HG00610, HG00689, HG00628, HG00533, HG00419, HG00634, HG00403, HG00584, HG00662, HG00436, HG00620, HG00653, HG00629, HG00559, HG00560, HG00501, HG00672, HG00478, HG00513, HG00524, HG00512, HG00534, HG00525, HG00589, HG00427, HG00590, HG00595, HG00443, HG00611, HG00650, HG00663, HG00580, HG00448, HG00608, HG00654, HG00530, HG00656, HG00422, HG00708, HG00693, HG00566, HG00625, HG00690, HG00442, HG00473, HG00626, HG00684, HG00476, HG00671, HG00702, HG00704, HG00531

Known Genes

LOC100506421, POU3F3

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2660782

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	91
Observed Complex	0
Frequency	n/a